fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028118 not found in 141aa AT3G23230.1 1st_1st 0.608490566 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23230.1     MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAY
gm028118_Glyma1 MEEHQKG---KLQGKEEVRFRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAY
                **. ::.   : *..::.************:********::*:*******:*********

AT3G23230.1     DRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEF
gm028118_Glyma1 DRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLATPSSSSHASESTSSAAQ-QRHVFEI
                *****************.***.:: . .  **: ::.**** .* **. : * **.***:

AT3G23230.1     EYLDDKVLEELLD-SEERKR-----
gm028118_Glyma1 PCLDDKVLEDLLGLSEEHKKKKKGD
                  *******:**. ***:*:
BoxShade v3.31 C (beta, 970507) Output
AT3G23230.1     M E S S N R S S N N Q S Q D D K Q A R F R G V R R R P W G K F A A E I R D P S R N G A R L W L G T F E T A E E A A R A Y
gm028118_Glyma1    M E E H Q K G - - - K L Q G K E E V R F R G V R R R P W G K Y A A E I R D P S K Q G S R L W L G T F D T A E E A A R A Y
 
AT3G23230.1     D R A A F N L R G H L A I L N F P N E Y Y P R M D D Y S L R P P Y A S S S S S S S S G S T S T N V S R Q N Q R E V F E F
gm028118_Glyma1    D R A A F N L R G H L A I L N F P S E Y Y S Q I R G S P P Y P P H L A T P S S S S H A S E S T S S A A Q - Q R H V F E I
 
AT3G23230.1     E Y L D D K V L E E L L D - S E E R K R - - - - -
gm028118_Glyma1    P C L D D K V L E D L L G L S E E H K K K K K G D
 
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