fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042984 not found in 287aa AT3G23250.1 not_1st 0.447470817 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23250.1     MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY
pt042984_POPTR_ MVRAPCCEKMGLKRGPWTPEEDQILISYVQKYGHSNWRALPKQAGLQRCGKSCRLRWVNY
                * ***********************:*:: ::************** **********:**

AT3G23250.1     LKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLEDYQ
pt042984_POPTR_ LRPDIKRGNFSKEEEEAIIKLHEILGNRWSAIASRLPGRTDNEIKNVWHTHLLKRL----
                *:********:****:***.**:**********::***************** ***    

AT3G23250.1     PAKPKTSNKKKGTKPKSESVITSSNSTRSESELADSSNPSGESL----------FSTSPS
pt042984_POPTR_ ---------KQNGEPKSQQHIRIPDCHLNDNKLSQSANSTIPSLSGCKSIEYAQISPQPS
                         *:. :***:. *  .:.  .:.:*::*:*.:  **          :*..**

AT3G23250.1     TSEVSSMT----LISHDGYSNEINMDNKPGDISTIDQECVSFETFGADIDESFWKETLYS
pt042984_POPTR_ SSDHSSVTDTSVTTSETNNTGLIKVEN-------ID----SSEIYPV-IDEDFWSEPEMV
                :*: **:*      *. . :. *:::*       **    * * : . ***.**.*.   

AT3G23250.1     QDEHNYVSNDLEVAGLVEIQQEFQNLGSANNEMIF------DSEMDFWFDVLARTGGEQD
pt042984_POPTR_ ENSGMPSSNFLD-----DSQFPFPSPDTMERAGCYGYGPKVDDNMEFWYNLFIKSGGIEE
                ::.    ** *:     : *  * . .: :.   :      *.:*:**:::: ::** ::

AT3G23250.1     L----------LAGL--
pt042984_POPTR_ LPVQYLQRYSYLADERI
                *          **.
BoxShade v3.31 C (beta, 970507) Output
AT3G23250.1     M G R A P C C E K M G L K R G P W T P E E D Q I L V S F I L N H G H S N W R A L P K Q A G L L R C G K S C R L R W M N Y
pt042984_POPTR_    M V R A P C C E K M G L K R G P W T P E E D Q I L I S Y V Q K Y G H S N W R A L P K Q A G L Q R C G K S C R L R W V N Y
 
AT3G23250.1     L K P D I K R G N F T K E E E D A I I S L H Q I L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L E D Y Q
pt042984_POPTR_    L R P D I K R G N F S K E E E E A I I K L H E I L G N R W S A I A S R L P G R T D N E I K N V W H T H L L K R L - - - -
 
AT3G23250.1     P A K P K T S N K K K G T K P K S E S V I T S S N S T R S E S E L A D S S N P S G E S L - - - - - - - - - - F S T S P S
pt042984_POPTR_    - - - - - - - - - K Q N G E P K S Q Q H I R I P D C H L N D N K L S Q S A N S T I P S L S G C K S I E Y A Q I S P Q P S
 
AT3G23250.1     T S E V S S M T - - - - L I S H D G Y S N E I N M D N K P G D I S T I D Q E C V S F E T F G A D I D E S F W K E T L Y S
pt042984_POPTR_    S S D H S S V T D T S V T T S E T N N T G L I K V E N - - - - - - - I D - - - - S S E I Y P V - I D E D F W S E P E M V
 
AT3G23250.1     Q D E H N Y V S N D L E V A G L V E I Q Q E F Q N L G S A N N E M I F - - - - - - D S E M D F W F D V L A R T G G E Q D
pt042984_POPTR_    E N S G M P S S N F L D - - - - - D S Q F P F P S P D T M E R A G C Y G Y G P K V D D N M E F W Y N L F I K S G G I E E
 
AT3G23250.1     L - - - - - - - - - - L A G L - -
pt042984_POPTR_    L P V Q Y L Q R Y S Y L A D E R I
 
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