fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001186 not found in 273aa AT3G23250.1 1st_1st 0.474708171 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23250.1     MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY
pt001186_POPTR_ MVRAPCCEKMGLKKGPWTAEEDQILINYIQLHGHGNWRALPKQAGLLRCGKSCRLRWINY
                * ***********:****.******:.:*  ***.**********************:**

AT3G23250.1     LKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLEDYQ
pt001186_POPTR_ LRPDIKRGNFSREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLE---
                *:********::****:**.**::**********:**********************   

AT3G23250.1     PAKPKTSNKKKGTKPKSESVITSSNSTRSESELADSSNPSG-----ESLFSTSPSTSEVS
pt001186_POPTR_ --KNHVTPEIKG---RSVDISRFDHELNTDQELLDSSNLAAGSDQTEEHRPISPQQCSSD
                  * :.: : **   :* .:   .:. .::.** **** :.     *.  . **. .. .

AT3G23250.1     SMTLISHDGYSNEINMDNKPGDISTIDQECVSFETFG--ADIDESFWKETLYSQDEHNYV
pt001186_POPTR_ TSSLIT--------------GDIDISNNMCMKIESSDDFPEMDESFWSEVL-SADNSRIV
                : :**:              ***.  :: *:.:*: .  .::*****.*.* * *: . *

AT3G23250.1     SNDLEVAG------------LVEIQQEFQNLGSANNEMIFDSEMDFWFDVLARTGGEQDL
pt001186_POPTR_ S-DFSAIGTEPQLQFPFSPLVIEVEQVY-----ATNSNMYDS-TEYWHDLFTRAGGSLDL
                * *:.. *            ::*::* :     *.*. ::**  ::*.*:::*:**. **

AT3G23250.1     LAGL
pt001186_POPTR_ PEI-
BoxShade v3.31 C (beta, 970507) Output
AT3G23250.1     M G R A P C C E K M G L K R G P W T P E E D Q I L V S F I L N H G H S N W R A L P K Q A G L L R C G K S C R L R W M N Y
pt001186_POPTR_    M V R A P C C E K M G L K K G P W T A E E D Q I L I N Y I Q L H G H G N W R A L P K Q A G L L R C G K S C R L R W I N Y
 
AT3G23250.1     L K P D I K R G N F T K E E E D A I I S L H Q I L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L E D Y Q
pt001186_POPTR_    L R P D I K R G N F S R E E E D T I I K L H E M L G N R W S A I A A R L P G R T D N E I K N V W H T H L K K R L E - - -
 
AT3G23250.1     P A K P K T S N K K K G T K P K S E S V I T S S N S T R S E S E L A D S S N P S G - - - - - E S L F S T S P S T S E V S
pt001186_POPTR_    - - K N H V T P E I K G - - - R S V D I S R F D H E L N T D Q E L L D S S N L A A G S D Q T E E H R P I S P Q Q C S S D
 
AT3G23250.1     S M T L I S H D G Y S N E I N M D N K P G D I S T I D Q E C V S F E T F G - - A D I D E S F W K E T L Y S Q D E H N Y V
pt001186_POPTR_    T S S L I T - - - - - - - - - - - - - - G D I D I S N N M C M K I E S S D D F P E M D E S F W S E V L - S A D N S R I V
 
AT3G23250.1     S N D L E V A G - - - - - - - - - - - - L V E I Q Q E F Q N L G S A N N E M I F D S E M D F W F D V L A R T G G E Q D L
pt001186_POPTR_    S - D F S A I G T E P Q L Q F P F S P L V I E V E Q V Y - - - - - A T N S N M Y D S - T E Y W H D L F T R A G G S L D L
 
AT3G23250.1     L A G L
pt001186_POPTR_    P E I -
 
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