fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026385 not found in 264aa AT3G23250.1 1st_1st 0.472762645 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23250.1     MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY
gm026385_Glyma1 MVRAPCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY
                * ***********:***********:*:* :***.******* **************:**

AT3G23250.1     LKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLEDYQ
gm026385_Glyma1 LRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLMN--
                *:********:.***: **.:*::******************************** :  

AT3G23250.1     PAKPKTSNKKKGTKPKSESVITSSNSTRSESELADSSNPSGESLFSTSPSTSEVSSMTLI
gm026385_Glyma1 -----SDTNKRVSKPRIKRS-DSNSSTLTQSEPTSSSGCTTSSDFS---SFSEGTK----
                     :..:*: :**: :    *..** ::** :.**. : .* **   * ** :.    

AT3G23250.1     SHDGYSNEINMDN--KPGDISTIDQECVSFETFGADIDESFW-KETL-YSQDEHNYVSND
gm026385_Glyma1 ---------NMDNMIKREDIE-------SMETVKPPIDESFWPQETVDYESSTMMQSSNS
                         ****  *  **.       *:**. . ****** :**: *...     **.

AT3G23250.1     LEVAGLVEIQQ-------EFQNLGSANNEMIFDSEMDFWFDVLARTGGEQDLLAGL
gm026385_Glyma1 WTISNELAPPQYQFNSVETFQQQSVGYNDSKFDDGMDFWYDIFIKSGESIELPEF-
                  ::. :   *        **: . . *:  **. ****:*:: ::* . :*
BoxShade v3.31 C (beta, 970507) Output
AT3G23250.1     M G R A P C C E K M G L K R G P W T P E E D Q I L V S F I L N H G H S N W R A L P K Q A G L L R C G K S C R L R W M N Y
gm026385_Glyma1    M V R A P C C E K M G L K K G P W T P E E D Q I L M S Y I Q K H G H G N W R A L P K L A G L L R C G K S C R L R W I N Y
 
AT3G23250.1     L K P D I K R G N F T K E E E D A I I S L H Q I L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L E D Y Q
gm026385_Glyma1    L R P D I K R G N F S S E E E E I I I K M H E L L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L M N - -
 
AT3G23250.1     P A K P K T S N K K K G T K P K S E S V I T S S N S T R S E S E L A D S S N P S G E S L F S T S P S T S E V S S M T L I
gm026385_Glyma1    - - - - - S D T N K R V S K P R I K R S - D S N S S T L T Q S E P T S S S G C T T S S D F S - - - S F S E G T K - - - -
 
AT3G23250.1     S H D G Y S N E I N M D N - - K P G D I S T I D Q E C V S F E T F G A D I D E S F W - K E T L - Y S Q D E H N Y V S N D
gm026385_Glyma1    - - - - - - - - - N M D N M I K R E D I E - - - - - - - S M E T V K P P I D E S F W P Q E T V D Y E S S T M M Q S S N S
 
AT3G23250.1     L E V A G L V E I Q Q - - - - - - - E F Q N L G S A N N E M I F D S E M D F W F D V L A R T G G E Q D L L A G L
gm026385_Glyma1    W T I S N E L A P P Q Y Q F N S V E T F Q Q Q S V G Y N D S K F D D G M D F W Y D I F I K S G E S I E L P E F -
 
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