Input
| Putative repression domain
|
|
AT3G24050.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt010179 |
not found in 258aa |
AT3G24050.1 |
1st_1st |
0.424164524 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G24050.1 MEMES------FM-DDLLNFSVPEEEEDDDEHTQPPRNITRRKTG---LRP----TDSFG
pt010179_POPTR_ --MESLDTAAGFMVDDLLDFCSDIGEGDDDEEHQ--NNNKKPRKGLPSLNPNALASASFN
*** ** ****:*. * ****. * .* .: :.* *.* : **.
AT3G24050.1 LFNTDDLGVVEEEDLEWISNKNAFPVIETFVGVLPSEHFPITSLLEREATEVKQLSPVSV
pt010179_POPTR_ VLEHTLLPEFAEEELEWLSNKDAFPAVETCFGILSEEPGSIP----------KHHSPVSV
::: * . **:***:***:***.:** .*:*..* .*. *: *****
AT3G24050.1 LETSSHSSTTTTSNSSGGSNGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRRTGRRDLR
pt010179_POPTR_ LENSTTSSTSISGNSSNSS-------------IIMSYC-SLRVPVKARSKRRHRRPREIR
**.*: ***: :.***..* *** * .::.*.*******: *::*
AT3G24050.1 V---LWTGNEQGGIQKKKTMTVAAAALIMGRKCQHCGAEKTPQWRAGPAGPKTLCNACGV
pt010179_POPTR_ EQERWWS--RENSTRRKPAVSVAK----MGRKCQHCGVEKTPQWRAGPDGPKTLCNACGV
*: .:.. ::* :::** *********.********** ***********
AT3G24050.1 RYKSGRLVPEYRPANSPTFTAELHSNSHRKIVEMRKQYQ-SGDGDGDRKDCG
pt010179_POPTR_ RYKSGRLVPEYRPANSPTFSSKLHSNSHRKVVEMRKQKQMMGSLVVKPMDKG
*******************:::********:****** * *. . * *
BoxShade v3.31 C (beta, 970507) Output
AT3G24050.1 |
M |
E |
M |
E |
S |
- |
- |
- |
- |
- |
- |
F |
M |
- |
D |
D |
L |
L |
N |
F |
S |
V |
P |
E |
E |
E |
E |
D |
D |
D |
E |
H |
T |
Q |
P |
P |
R |
N |
I |
T |
R |
R |
K |
T |
G |
- |
- |
- |
L |
R |
P |
- |
- |
- |
- |
T |
D |
S |
F |
G |
pt010179_POPTR_ |
- |
- |
M |
E |
S |
L |
D |
T |
A |
A |
G |
F |
M |
V |
D |
D |
L |
L |
D |
F |
C |
S |
D |
I |
G |
E |
G |
D |
D |
D |
E |
E |
H |
Q |
- |
- |
N |
N |
N |
K |
K |
P |
R |
K |
G |
L |
P |
S |
L |
N |
P |
N |
A |
L |
A |
S |
A |
S |
F |
N |
|
AT3G24050.1 |
L |
F |
N |
T |
D |
D |
L |
G |
V |
V |
E |
E |
E |
D |
L |
E |
W |
I |
S |
N |
K |
N |
A |
F |
P |
V |
I |
E |
T |
F |
V |
G |
V |
L |
P |
S |
E |
H |
F |
P |
I |
T |
S |
L |
L |
E |
R |
E |
A |
T |
E |
V |
K |
Q |
L |
S |
P |
V |
S |
V |
pt010179_POPTR_ |
V |
L |
E |
H |
T |
L |
L |
P |
E |
F |
A |
E |
E |
E |
L |
E |
W |
L |
S |
N |
K |
D |
A |
F |
P |
A |
V |
E |
T |
C |
F |
G |
I |
L |
S |
E |
E |
P |
G |
S |
I |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
K |
H |
H |
S |
P |
V |
S |
V |
|
AT3G24050.1 |
L |
E |
T |
S |
S |
H |
S |
S |
T |
T |
T |
T |
S |
N |
S |
S |
G |
G |
S |
N |
G |
S |
T |
A |
V |
A |
T |
T |
T |
T |
T |
P |
T |
I |
M |
S |
C |
C |
V |
G |
F |
K |
A |
P |
A |
K |
A |
R |
S |
K |
R |
R |
R |
T |
G |
R |
R |
D |
L |
R |
pt010179_POPTR_ |
L |
E |
N |
S |
T |
T |
S |
S |
T |
S |
I |
S |
G |
N |
S |
S |
N |
S |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
I |
I |
M |
S |
Y |
C |
- |
S |
L |
R |
V |
P |
V |
K |
A |
R |
S |
K |
R |
R |
H |
R |
R |
P |
R |
E |
I |
R |
|
AT3G24050.1 |
V |
- |
- |
- |
L |
W |
T |
G |
N |
E |
Q |
G |
G |
I |
Q |
K |
K |
K |
T |
M |
T |
V |
A |
A |
A |
A |
L |
I |
M |
G |
R |
K |
C |
Q |
H |
C |
G |
A |
E |
K |
T |
P |
Q |
W |
R |
A |
G |
P |
A |
G |
P |
K |
T |
L |
C |
N |
A |
C |
G |
V |
pt010179_POPTR_ |
E |
Q |
E |
R |
W |
W |
S |
- |
- |
R |
E |
N |
S |
T |
R |
R |
K |
P |
A |
V |
S |
V |
A |
K |
- |
- |
- |
- |
M |
G |
R |
K |
C |
Q |
H |
C |
G |
V |
E |
K |
T |
P |
Q |
W |
R |
A |
G |
P |
D |
G |
P |
K |
T |
L |
C |
N |
A |
C |
G |
V |
|
AT3G24050.1 |
R |
Y |
K |
S |
G |
R |
L |
V |
P |
E |
Y |
R |
P |
A |
N |
S |
P |
T |
F |
T |
A |
E |
L |
H |
S |
N |
S |
H |
R |
K |
I |
V |
E |
M |
R |
K |
Q |
Y |
Q |
- |
S |
G |
D |
G |
D |
G |
D |
R |
K |
D |
C |
G |
pt010179_POPTR_ |
R |
Y |
K |
S |
G |
R |
L |
V |
P |
E |
Y |
R |
P |
A |
N |
S |
P |
T |
F |
S |
S |
K |
L |
H |
S |
N |
S |
H |
R |
K |
V |
V |
E |
M |
R |
K |
Q |
K |
Q |
M |
M |
G |
S |
L |
V |
V |
K |
P |
M |
D |
K |
G |
|
|