fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029592 not found in 303aa AT4G13640.1 1st_not 0.619047619 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24120.1     MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ
pt029592_POPTR_ MYSAIHSLPLD-GH--GDFQAALDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVAQ
                *****:***** **  **::..*************************:**********:*

AT3G24120.1     LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTG
pt029592_POPTR_ LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDAS-VAESQDTG
                ********************************:***:*: ****:****** *.******

AT3G24120.1     SSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSILE
pt029592_POPTR_ SSTSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE
                **:::* **  *: *:*********.*********:************************

AT3G24120.1     KACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAI
pt029592_POPTR_ KACKALNDQAVATAGLEAAREELSELAIKVSNERAGIA-----PLDTMKMPSISELAAAL
                *****:::**.: *******************.  * :     . . * ***:****.*:

AT3G24120.1     DNK--NNITT---NCSVESSLTSITHGSSIS-------AASMKKRQR-----GDNL----
pt029592_POPTR_ ENKHASNVPARVGDCSVESCLTST--GSPVSPMGVGAQVASTKKRSRPVFGNGDSLPFDG
                :**  .*:.:   :*****.***   **.:*       .** ***.*     **.*    

AT3G24120.1     GVGYESGWIMPSSTIG
pt029592_POPTR_ NIQQEVEWTMNNIV--
                .:  *  * * . .
BoxShade v3.31 C (beta, 970507) Output
AT3G24120.1     M Y S A I R S L P L D G G H V G G D Y H G P L D G T N L P G D A C L V L T T D P K P R L R W T T E L H E R F V D A V T Q
pt029592_POPTR_    M Y S A I H S L P L D - G H - - G D F Q A A L D G T N L P G D A C L V L T T D P K P R L R W T A E L H E R F V D A V A Q
 
AT3G24120.1     L G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K F R L G R Q A G K E S T E N S K D A S C V G E S Q D T G
pt029592_POPTR_    L G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K Y R L G K Q S C K E S T D N S K D A S - V A E S Q D T G
 
AT3G24120.1     S S S T S S M R M A Q Q E Q N E G Y Q V T E A L R A Q M E V Q R R L H D Q L E V Q R R L Q L R I E A Q G K Y L Q S I L E
pt029592_POPTR_    S S T S A S S R M I A Q D L N D G Y Q V T E A L R V Q M E V Q R R L H E Q L E V Q R R L Q L R I E A Q G K Y L Q S I L E
 
AT3G24120.1     K A C K A F D E Q A A T F A G L E A A R E E L S E L A I K V S N S S Q G T S V P Y F D A T K M M M M P S L S E L A V A I
pt029592_POPTR_    K A C K A L N D Q A V A T A G L E A A R E E L S E L A I K V S N E R A G I A - - - - - P L D T M K M P S I S E L A A A L
 
AT3G24120.1     D N K - - N N I T T - - - N C S V E S S L T S I T H G S S I S - - - - - - - A A S M K K R Q R - - - - - G D N L - - - -
pt029592_POPTR_    E N K H A S N V P A R V G D C S V E S C L T S T - - G S P V S P M G V G A Q V A S T K K R S R P V F G N G D S L P F D G
 
AT3G24120.1     G V G Y E S G W I M P S S T I G
pt029592_POPTR_    N I Q Q E V E W T M N N I V - -
 
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