fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029591 not found in 307aa AT4G13640.1 not_not 0.613553113 III
Pt004779 not found in 309aa AT4G13640.1 not_not 0.606227106 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G24120.1     MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ
pt029591_POPTR_ MYSAIHSLPLD-GH--GDFQAALDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVAQ
pt004779_POPTR_ MYSAIHSLPLD-GH--GDFQASLDGINLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQ
                *****:***** **  **::..*** *********************:**********:*

AT3G24120.1     LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKD---ASCVGESQ
pt029591_POPTR_ LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDVGIAASVAESQ
pt004779_POPTR_ LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDVGIAPSVAESQ
                ********************************:***:*: ****:****   *..*.***

AT3G24120.1     DTGSSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQS
pt029591_POPTR_ DTGSSTSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQS
pt004779_POPTR_ DTGSSTSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQHHLQLRIEAQGKYLQS
                *****:::* **  *: *:*********.*********:*****::**************

AT3G24120.1     ILEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELA
pt029591_POPTR_ ILEKACKALNDQAVATAGLEAAREELSELAIKVSNERAGIA-----PLDTMKMPSISELA
pt004779_POPTR_ ILEKACKALNDQAVATAGLEAAREELSELAIKVSNECAGIA-----PLDTMKMPSLSELA
                ********:::**.: *******************.  * :     . . * ***:****

AT3G24120.1     VAIDNKN--NITT---NCSVESSLTSITHGSSIS-------AASMKKRQR-----GDNL-
pt029591_POPTR_ AALENKHASNVPARVGDCSVESCLTST--GSPVSPMGVGAQVASTKKRSRPVFGNGDSLP
pt004779_POPTR_ AALGNRNASNVPARIGDCSVESCLTST--SSPVSPMGVGSQVASTKKRSRPVLGNGDSLP
                .*: *::  *:.:   :*****.***   .*.:*       .** ***.*     **.* 

AT3G24120.1     ---GVGYESGWIMPSSTIG
pt029591_POPTR_ FDGNIQQEVEWTMNNIV--
pt004779_POPTR_ FEGNFRQEVEWTMSNIVDE
                   ..  *  * * . .
BoxShade v3.31 C (beta, 970507) Output
AT3G24120.1     M Y S A I R S L P L D G G H V G G D Y H G P L D G T N L P G D A C L V L T T D P K P R L R W T T E L H E R F V D A V T Q
pt029591_POPTR_    M Y S A I H S L P L D - G H - - G D F Q A A L D G T N L P G D A C L V L T T D P K P R L R W T A E L H E R F V D A V A Q
pt004779_POPTR_    M Y S A I H S L P L D - G H - - G D F Q A S L D G I N L P G D A C L V L T T D P K P R L R W T A E L H E R F V D A V T Q
 
AT3G24120.1     L G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K F R L G R Q A G K E S T E N S K D - - - A S C V G E S Q
pt029591_POPTR_    L G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K Y R L G K Q S C K E S T D N S K D V G I A A S V A E S Q
pt004779_POPTR_    L G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K Y R L G K Q S C K E S T D N S K D V G I A P S V A E S Q
 
AT3G24120.1     D T G S S S T S S M R M A Q Q E Q N E G Y Q V T E A L R A Q M E V Q R R L H D Q L E V Q R R L Q L R I E A Q G K Y L Q S
pt029591_POPTR_    D T G S S T S A S S R M I A Q D L N D G Y Q V T E A L R V Q M E V Q R R L H E Q L E V Q R R L Q L R I E A Q G K Y L Q S
pt004779_POPTR_    D T G S S T S A S S R M I A Q D L N D G Y Q V T E A L R V Q M E V Q R R L H E Q L E V Q H H L Q L R I E A Q G K Y L Q S
 
AT3G24120.1     I L E K A C K A F D E Q A A T F A G L E A A R E E L S E L A I K V S N S S Q G T S V P Y F D A T K M M M M P S L S E L A
pt029591_POPTR_    I L E K A C K A L N D Q A V A T A G L E A A R E E L S E L A I K V S N E R A G I A - - - - - P L D T M K M P S I S E L A
pt004779_POPTR_    I L E K A C K A L N D Q A V A T A G L E A A R E E L S E L A I K V S N E C A G I A - - - - - P L D T M K M P S L S E L A
 
AT3G24120.1     V A I D N K N - - N I T T - - - N C S V E S S L T S I T H G S S I S - - - - - - - A A S M K K R Q R - - - - - G D N L -
pt029591_POPTR_    A A L E N K H A S N V P A R V G D C S V E S C L T S T - - G S P V S P M G V G A Q V A S T K K R S R P V F G N G D S L P
pt004779_POPTR_    A A L G N R N A S N V P A R I G D C S V E S C L T S T - - S S P V S P M G V G S Q V A S T K K R S R P V L G N G D S L P
 
AT3G24120.1     - - - G V G Y E S G W I M P S S T I G
pt029591_POPTR_    F D G N I Q Q E V E W T M N N I V - -
pt004779_POPTR_    F E G N F R Q E V E W T M S N I V D E
 
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