fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028215 not found in 304aa AT3G24120.1 1st_1st 0.355311355 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24120.1     MYSAIRSLPLDGGH--VGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAV
gm028215_Glyma1 MFSRLIH-PHEGQEDMQGGSNHAHL------GDPCLVLTSDPKPRLRWTADLHERFVDAV
                *:* :   * :* .   **. *. *      **.*****:*********::*********

AT3G24120.1     TQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQD
gm028215_Glyma1 TQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGLKDASYLQESPG
                *****..*****:*****.***************:***:*:**:* *. **** : ** .

AT3G24120.1     TGSSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSI
gm028215_Glyma1 TDNSSP---KLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYM-GM
                *..**.   ::. .: ***::*.********** :**  :*.:::**:* :*: :*: .:

AT3G24120.1     LEKACKAF----------DEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDA--TK
gm028215_Glyma1 LERACKMLADQFIGDVIIDRDGQKFQGLEN----------KTSRSPLVDHGGFFPAACTE
                **:*** :          *.:. .* ***           *.*.*.      :* *  *:

AT3G24120.1     MMMMPSLSELAVAIDNKNNITTNCSVESSLTSITH--GSSISAASMKKRQRGDNLGVGYE
gm028215_Glyma1 VGGM-HVSEVPPILQPQG---AECSSESCLKSLESLGGLTLEGSPGGSKKRMLNL-----
                :  *  :**:.  :: :.   ::** **.*.*:    * ::..:.  .::*  **     

AT3G24120.1     SGWIMP-------SSTIG----------------
gm028215_Glyma1 DSMVAPLIWSEANTRTQGIHLAQVNPPGMTRYGM
                .. : *       : * *
BoxShade v3.31 C (beta, 970507) Output
AT3G24120.1     M Y S A I R S L P L D G G H - - V G G D Y H G P L D G T N L P G D A C L V L T T D P K P R L R W T T E L H E R F V D A V
gm028215_Glyma1    M F S R L I H - P H E G Q E D M Q G G S N H A H L - - - - - - G D P C L V L T S D P K P R L R W T A D L H E R F V D A V
 
AT3G24120.1     T Q L G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K F R L G R Q A G K E S T E N S K D A S C V G E S Q D
gm028215_Glyma1    T Q L G G A S K A T P K A I M R T M N V K G L T L Y H L K S H L Q K Y R L G K Q S G K D S D E G L K D A S Y L Q E S P G
 
AT3G24120.1     T G S S S T S S M R M A Q Q E Q N E G Y Q V T E A L R A Q M E V Q R R L H D Q L E V Q R R L Q L R I E A Q G K Y L Q S I
gm028215_Glyma1    T D N S S P - - - K L P A S D A N E G H E V K E A L R A Q M E V Q S K L H L L V E A E K H L Q I R Q D A E R R Y M - G M
 
AT3G24120.1     L E K A C K A F - - - - - - - - - - D E Q A A T F A G L E A A R E E L S E L A I K V S N S S Q G T S V P Y F D A - - T K
gm028215_Glyma1    L E R A C K M L A D Q F I G D V I I D R D G Q K F Q G L E N - - - - - - - - - - K T S R S P L V D H G G F F P A A C T E
 
AT3G24120.1     M M M M P S L S E L A V A I D N K N N I T T N C S V E S S L T S I T H - - G S S I S A A S M K K R Q R G D N L G V G Y E
gm028215_Glyma1    V G G M - H V S E V P P I L Q P Q G - - - A E C S S E S C L K S L E S L G G L T L E G S P G G S K K R M L N L - - - - -
 
AT3G24120.1     S G W I M P - - - - - - - S S T I G - - - - - - - - - - - - - - - -
gm028215_Glyma1    D S M V A P L I W S E A N T R T Q G I H L A Q V N P P G M T R Y G M
 
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