fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004474 not found in 356aa AT3G24140.1 not_1st 0.501661129 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24140.1     MDKDYSAPNFLGESSGGNDDNSSGMIDYMFNRNLQQQQKQSMPQQQQHQLSPSGF-GATP
pt004474_POPTR_ ----------------------------MLNN----------PHQHQPQMS-SGFCTSTS
                                            *:*.          *:*:* *:* ***  :*.

AT3G24140.1     FDKMNFSDVMQFADFGSKLALNQTRNQDDQETGIDPVYFLKFPVLNDKIEDH--------
pt004474_POPTR_ FDKLSLADVMQFADFGPTLALNQTK-ISEEEIGIDPVYFLKFPVLNDKIEEQSLMVPQLG
                ***:.::*********..******:  .::* ******************::        

AT3G24140.1     --NQTQHLMPSHQTSQEG--GECGGNIGNVFLEEKEDQDDD-NDNNSVQLRFIGGEEEDR
pt004474_POPTR_ RENDERFTGVSSDENREGMAGEEGG--------VREDEEARLSDNNSVQLQLLG--DQDL
                  *: :.   * : .:**  ** **         :**::   .*******:::*  ::* 

AT3G24140.1     ENKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYV
pt004474_POPTR_ QNKN-SKPGSKNKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSFMPGSYV
                :*** :*   *.****.** *********************************:******

AT3G24140.1     QRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQA
pt004474_POPTR_ QRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLMEDSAVAIQQTHPPFFPPMPLPNDQM
                *********************************:: ::.  :  * ..  .*:.   :* 

AT3G24140.1     QPLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAA
pt004474_POPTR_ KTLDL-----ETE----LREETAENKSCLADVEVKLVGFDAMIKILSRRRPGQLSKTIAA
                :.* :     * *    *******************:***************** *****

AT3G24140.1     LEDLHLSILHTNITTMEQTVLYSFNVKITSETRFTAEDIASSIQQIFSFIHANTNISGSS
pt004474_POPTR_ LEDLQLNIHDTNITTIDQTVLYSFNVKIESESRFTAEDIASSVQHAFTFIHANSSM----
                ****:*.* .*****::*********** **:**********:*: *:*****:.:    

AT3G24140.1     NLGNIVFT
pt004474_POPTR_ --------
BoxShade v3.31 C (beta, 970507) Output
AT3G24140.1     M D K D Y S A P N F L G E S S G G N D D N S S G M I D Y M F N R N L Q Q Q Q K Q S M P Q Q Q Q H Q L S P S G F - G A T P
pt004474_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - M L N N - - - - - - - - - - P H Q H Q P Q M S - S G F C T S T S
 
AT3G24140.1     F D K M N F S D V M Q F A D F G S K L A L N Q T R N Q D D Q E T G I D P V Y F L K F P V L N D K I E D H - - - - - - - -
pt004474_POPTR_    F D K L S L A D V M Q F A D F G P T L A L N Q T K - I S E E E I G I D P V Y F L K F P V L N D K I E E Q S L M V P Q L G
 
AT3G24140.1     - - N Q T Q H L M P S H Q T S Q E G - - G E C G G N I G N V F L E E K E D Q D D D - N D N N S V Q L R F I G G E E E D R
pt004474_POPTR_    R E N D E R F T G V S S D E N R E G M A G E E G G - - - - - - - - V R E D E E A R L S D N N S V Q L Q L L G - - D Q D L
 
AT3G24140.1     E N K N V T K K E V K S K R K R A R T S K T S E E V E S Q R M T H I A V E R N R R K Q M N E H L R V L R S L M P G S Y V
pt004474_POPTR_    Q N K N - S K P G S K N K R K R P R T I K T S E E V E S Q R M T H I A V E R N R R K Q M N E H L R V L R S F M P G S Y V
 
AT3G24140.1     Q R G D Q A S I I G G A I E F V R E L E Q L L Q C L E S Q K R R R I L G E T G R D M T T T T T S S S S P I T T V A N Q A
pt004474_POPTR_    Q R G D Q A S I I G G A I E F V R E L E Q L L Q C L E S Q K R R R L M E D S A V A I Q Q T H P P F F P P M P L P N D Q M
 
AT3G24140.1     Q P L I I T G N V T E L E G G G G L R E E T A E N K S C L A D V E V K L L G F D A M I K I L S R R R P G Q L I K T I A A
pt004474_POPTR_    K T L D L - - - - - E T E - - - - L R E E T A E N K S C L A D V E V K L V G F D A M I K I L S R R R P G Q L S K T I A A
 
AT3G24140.1     L E D L H L S I L H T N I T T M E Q T V L Y S F N V K I T S E T R F T A E D I A S S I Q Q I F S F I H A N T N I S G S S
pt004474_POPTR_    L E D L Q L N I H D T N I T T I D Q T V L Y S F N V K I E S E S R F T A E D I A S S V Q H A F T F I H A N S S M - - - -
 
AT3G24140.1     N L G N I V F T
pt004474_POPTR_    - - - - - - - -
 
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