fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030285 not found in 409aa AT3G24140.1 1st_1st 0.531561461 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24140.1     MDK-----------DYS------APNFLG------ESSGGNDDNSSGMIDYMFNRNLQQQ
pt030285_POPTR_ MDKEENYSGSFTELDYSLDHHHQQQDHLGLMKQRIGGTSGDDDCNNGMIDYMLNN-----
                ***           ***        :.**       .:.*:** ..******:*.     

AT3G24140.1     QKQSMPQQQQHQLSPSGF-GATPFDKMNFSDVMQFADFGSKLALNQTRNQDDQETGIDPV
pt030285_POPTR_ -----PQQHQQQMS-SGFCTSTSFDKLSFADVMQFADFGPKLALNQNK-ISEEETGIDPV
                     ***:*:*:* ***  :*.***:.*:*********.******.:  .::*******

AT3G24140.1     YFLKFPVLNDKIEDHNQTQHLMPSHQTSQEGGE----------CGGNIGNVFLEEKEDQD
pt030285_POPTR_ YFLKFPVLNDKIEEQ--------SIRVPQLGGENIEEMFTGVSSGENRAGMVGEERGIGE
                *************::        * :..* ***          .* * ..:. **:   :

AT3G24140.1     DD----NDNNSVQLRFIGGEEEDRENKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAV
pt030285_POPTR_ DEEARISDNNSVQLQFLG--DQDLQNKNPI-PEAKNKRKRPRTIKTSEEVESQRMTHIAV
                *:    .*******:*:*  ::* :***    *.*.****.** ****************

AT3G24140.1     ERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILG
pt030285_POPTR_ ERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLMD
                *********************************************************::.

AT3G24140.1     ETGRDMTTTTTSSSSPITTVANQA--QPLIITGNVTEL-EGGGGLREETAENKSCLADVE
pt030285_POPTR_ D-----------SSLAIQQPAQPAFFSPMPLPNDQMKLVDFETGLREETAENKSCLADVE
                :           ** .*   *: *  .*: :..:  :* :   *****************

AT3G24140.1     VKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITSETR
pt030285_POPTR_ VKLLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIDQTVLYSFNVKIASDSG
                ***********************:*******:*.********::***********:*:: 

AT3G24140.1     FTAEDIASSIQQIFSFIHANTNISGSSNLGNIVFT
pt030285_POPTR_ FTAEDIASSVQQIFNFIHANSSI------------
                *********:****.*****:.*
BoxShade v3.31 C (beta, 970507) Output
AT3G24140.1     M D K - - - - - - - - - - - D Y S - - - - - - A P N F L G - - - - - - E S S G G N D D N S S G M I D Y M F N R N L Q Q Q
pt030285_POPTR_    M D K E E N Y S G S F T E L D Y S L D H H H Q Q Q D H L G L M K Q R I G G T S G D D D C N N G M I D Y M L N N - - - - -
 
AT3G24140.1     Q K Q S M P Q Q Q Q H Q L S P S G F - G A T P F D K M N F S D V M Q F A D F G S K L A L N Q T R N Q D D Q E T G I D P V
pt030285_POPTR_    - - - - - P Q Q H Q Q Q M S - S G F C T S T S F D K L S F A D V M Q F A D F G P K L A L N Q N K - I S E E E T G I D P V
 
AT3G24140.1     Y F L K F P V L N D K I E D H N Q T Q H L M P S H Q T S Q E G G E - - - - - - - - - - C G G N I G N V F L E E K E D Q D
pt030285_POPTR_    Y F L K F P V L N D K I E E Q - - - - - - - - S I R V P Q L G G E N I E E M F T G V S S G E N R A G M V G E E R G I G E
 
AT3G24140.1     D D - - - - N D N N S V Q L R F I G G E E E D R E N K N V T K K E V K S K R K R A R T S K T S E E V E S Q R M T H I A V
pt030285_POPTR_    D E E A R I S D N N S V Q L Q F L G - - D Q D L Q N K N P I - P E A K N K R K R P R T I K T S E E V E S Q R M T H I A V
 
AT3G24140.1     E R N R R K Q M N E H L R V L R S L M P G S Y V Q R G D Q A S I I G G A I E F V R E L E Q L L Q C L E S Q K R R R I L G
pt030285_POPTR_    E R N R R K Q M N E H L R V L R S L M P G S Y V Q R G D Q A S I I G G A I E F V R E L E Q L L Q C L E S Q K R R R L M D
 
AT3G24140.1     E T G R D M T T T T T S S S S P I T T V A N Q A - - Q P L I I T G N V T E L - E G G G G L R E E T A E N K S C L A D V E
pt030285_POPTR_    D - - - - - - - - - - - S S L A I Q Q P A Q P A F F S P M P L P N D Q M K L V D F E T G L R E E T A E N K S C L A D V E
 
AT3G24140.1     V K L L G F D A M I K I L S R R R P G Q L I K T I A A L E D L H L S I L H T N I T T M E Q T V L Y S F N V K I T S E T R
pt030285_POPTR_    V K L L G F D A M I K I L S R R R P G Q L I K A I A A L E D L Q L N I L H T N I T T I D Q T V L Y S F N V K I A S D S G
 
AT3G24140.1     F T A E D I A S S I Q Q I F S F I H A N T N I S G S S N L G N I V F T
pt030285_POPTR_    F T A E D I A S S V Q Q I F N F I H A N S S I - - - - - - - - - - - -
 
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