fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003863 not found in 399aa AT3G24140.1 not_1st 0.528239202 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24140.1     MDKDYSAPNFLGESSGGNDDNSSGMIDYMFNRNLQQQQKQSMPQQQQHQLSPSGF-----
gm003863_Glyma0 MK--------FQQGSGDENNNIGSMVDY-------------MPQTTT-TLPPHGFYGTAT
                *.        : :.**.:::* ..*:**             ***     *.* **     

AT3G24140.1     --GATPFDKMNFSDVMQFADFGSKLALNQTRNQDDQETGIDPVYFLKFPVLNDKIEDHNQ
gm003863_Glyma0 SAATTSYDKLSFADVMQFADFGPKLALNQAKSC--EESAIDPVYFLKFPVLNDKMEEDHQ
                  .:*.:**:.*:*********.******::.   :*:.***************:*:.:*

AT3G24140.1     TQHLMPSHQ-------------------TSQEGGECGGNIGNVFLEEKEDQD----DDND
gm003863_Glyma0 -QNMMVNNDDPDGDEAENHHHLDERFNLVSVEGKDQG-------MMMREDEETTRVSDDN
                 *::* .::                   .* ** : *       :  :**::    .*::

AT3G24140.1     NNSVQLRFIGGEEEDRENKNVTKKEVKS-KRKRARTSKTSEEVESQRMTHIAVERNRRKQ
gm003863_Glyma0 NNSVQIRFLGHEEP--QQKNCAVQENKNGKKKRPRTVKTSEEVESQRMTHIAVERNRRKQ
                *****:**:* **   ::** : :* *. *:**.** ***********************

AT3G24140.1     MNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMT
gm003863_Glyma0 MNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGE------
                **************************************************:***      

AT3G24140.1     TTTTSSSSPITTVANQAQP-----LIITGNVTEL-EGGGGLREETAENKSCLADVEVKLL
gm003863_Glyma0 AQARQVGDPSLVAQQQQQPPFFPTLPIPNEQMKLVEMETGLREETAECKSCLADVEVKLL
                : : . ..*  .. :* **     * *..:  :* *   ******** ************

AT3G24140.1     GFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITSETRFTAE
gm003863_Glyma0 GFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNITTIEQTVLYSFNVKVASDSRFTAE
                ***************************:* ********:***********::*::*****

AT3G24140.1     DIASSIQQIFSFIHANTNISGSSNLGNIVFT
gm003863_Glyma0 DIASSVQQIFNFIHANTSM------------
                *****:****.******.:
BoxShade v3.31 C (beta, 970507) Output
AT3G24140.1     M D K D Y S A P N F L G E S S G G N D D N S S G M I D Y M F N R N L Q Q Q Q K Q S M P Q Q Q Q H Q L S P S G F - - - - -
gm003863_Glyma0    M K - - - - - - - - F Q Q G S G D E N N N I G S M V D Y - - - - - - - - - - - - - M P Q T T T - T L P P H G F Y G T A T
 
AT3G24140.1     - - G A T P F D K M N F S D V M Q F A D F G S K L A L N Q T R N Q D D Q E T G I D P V Y F L K F P V L N D K I E D H N Q
gm003863_Glyma0    S A A T T S Y D K L S F A D V M Q F A D F G P K L A L N Q A K S C - - E E S A I D P V Y F L K F P V L N D K M E E D H Q
 
AT3G24140.1     T Q H L M P S H Q - - - - - - - - - - - - - - - - - - - T S Q E G G E C G G N I G N V F L E E K E D Q D - - - - D D N D
gm003863_Glyma0    - Q N M M V N N D D P D G D E A E N H H H L D E R F N L V S V E G K D Q G - - - - - - - M M M R E D E E T T R V S D D N
 
AT3G24140.1     N N S V Q L R F I G G E E E D R E N K N V T K K E V K S - K R K R A R T S K T S E E V E S Q R M T H I A V E R N R R K Q
gm003863_Glyma0    N N S V Q I R F L G H E E P - - Q Q K N C A V Q E N K N G K K K R P R T V K T S E E V E S Q R M T H I A V E R N R R K Q
 
AT3G24140.1     M N E H L R V L R S L M P G S Y V Q R G D Q A S I I G G A I E F V R E L E Q L L Q C L E S Q K R R R I L G E T G R D M T
gm003863_Glyma0    M N E H L R V L R S L M P G S Y V Q R G D Q A S I I G G A I E F V R E L E Q L L Q C L E S Q K R R R L L G E - - - - - -
 
AT3G24140.1     T T T T S S S S P I T T V A N Q A Q P - - - - - L I I T G N V T E L - E G G G G L R E E T A E N K S C L A D V E V K L L
gm003863_Glyma0    A Q A R Q V G D P S L V A Q Q Q Q Q P P F F P T L P I P N E Q M K L V E M E T G L R E E T A E C K S C L A D V E V K L L
 
AT3G24140.1     G F D A M I K I L S R R R P G Q L I K T I A A L E D L H L S I L H T N I T T M E Q T V L Y S F N V K I T S E T R F T A E
gm003863_Glyma0    G F D A M I K I L S R R R P G Q L I K T I A A L E D L Q L I I L H T N I T T I E Q T V L Y S F N V K V A S D S R F T A E
 
AT3G24140.1     D I A S S I Q Q I F S F I H A N T N I S G S S N L G N I V F T
gm003863_Glyma0    D I A S S V Q Q I F N F I H A N T S M - - - - - - - - - - - -
 
0