fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041020 not found in 264aa AT3G24310.1 not_1st 0.578199052 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24310.1     MSLWGGMGG--GW-GMVEEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGK
pt041020_POPTR_ MS-WGVMAGQLAWGGLIEEGWRKGPWTAEEDRLLIEYVRLHGDGRWSSVARLAGLKRNGK
                ** ** *.*  .* *::******************:**:***:***.*************

AT3G24310.1     SCRLRWVNYLRPDLKRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTH
pt041020_POPTR_ SCRLRWVNYLRPDLKRGQITPHEESIIVELHARWGNRWSTIARSLPGRTDNEIKNYWRTH
                ************************:**:****:***************************

AT3G24310.1     FKKKTK-SPTNSAEKTKNRILKRQQFQQ-----QRQMELQQEQQLLQFNQIDMKKIMSLL
pt041020_POPTR_ FKKKAKLSPDNS-DKARTRHLKRQQFQQQQQQLQRQQQQTQHQQPLQINQLDMRKIVSLL
                ****:* ** ** :*::.* ********     *** :  *.** **:**:**:**:***

AT3G24310.1     DDDNNNGDNTFSSSSSGESGALYVPHQITHSTTTSGCEPNS-------NGYYPVVPVTIP
pt041020_POPTR_ DENEDKAPCTPQMRQE------MAPHAIY---------PNTIEEHVLLYNMFNVNNASVP
                *:::::.  * .  ..       .** *          **:        . : *  .::*

AT3G24310.1     EANVNEDNAIWDGLWNLDFEGQGSFGGAACAPRKHYFQNMVIPFC
pt041020_POPTR_ EAS-NED-ILWDGLWNLD-DLHGNL-GVACATSKASMQNLVAPFC
                **. ***  :******** : :*.: *.***. *  :**:* ***
BoxShade v3.31 C (beta, 970507) Output
AT3G24310.1     M S L W G G M G G - - G W - G M V E E G W R K G P W T A E E D R L L I D Y V Q L H G E G R W N S V A R L A G L K R N G K
pt041020_POPTR_    M S - W G V M A G Q L A W G G L I E E G W R K G P W T A E E D R L L I E Y V R L H G D G R W S S V A R L A G L K R N G K
 
AT3G24310.1     S C R L R W V N Y L R P D L K R G Q I T P H E E T I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H
pt041020_POPTR_    S C R L R W V N Y L R P D L K R G Q I T P H E E S I I V E L H A R W G N R W S T I A R S L P G R T D N E I K N Y W R T H
 
AT3G24310.1     F K K K T K - S P T N S A E K T K N R I L K R Q Q F Q Q - - - - - Q R Q M E L Q Q E Q Q L L Q F N Q I D M K K I M S L L
pt041020_POPTR_    F K K K A K L S P D N S - D K A R T R H L K R Q Q F Q Q Q Q Q Q L Q R Q Q Q Q T Q H Q Q P L Q I N Q L D M R K I V S L L
 
AT3G24310.1     D D D N N N G D N T F S S S S S G E S G A L Y V P H Q I T H S T T T S G C E P N S - - - - - - - N G Y Y P V V P V T I P
pt041020_POPTR_    D E N E D K A P C T P Q M R Q E - - - - - - M A P H A I Y - - - - - - - - - P N T I E E H V L L Y N M F N V N N A S V P
 
AT3G24310.1     E A N V N E D N A I W D G L W N L D F E G Q G S F G G A A C A P R K H Y F Q N M V I P F C
pt041020_POPTR_    E A S - N E D - I L W D G L W N L D - D L H G N L - G V A C A T S K A S M Q N L V A P F C
 
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