fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008808 not found in 289aa AT3G24310.1 not_1st 0.485781990 II
Os011162 not found in 247aa AT3G24310.1 not_1st 0.445497630 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G24310.1     ----MSLWGGMGGGWGMVEEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNG
Os011162_Os03t0 MDEIRSLMLQQ---------GWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSG
Os008808_Os02t0 ------MEGQQF-AWGREEGGWRKGPWTAQEDKLLVEYVRQHGEGRWNSVAKITGLKRSG
                      :             ********* **:** :**: **** *****:::**:*.*

AT3G24310.1     KSCRLRWVNYLRPDLKRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRT
Os011162_Os03t0 KSCRLRWVNYLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRT
Os008808_Os02t0 KSCRLRWVNYLRPDLKRGKITPQEESVILELHALWGNRWSTIARSLPGRTDNEIKNYWRT
                ******************:***.**::**:***  *****:***.***************

AT3G24310.1     HFKKKTKSPTNSAEKTKNRIL---KRQQFQQQRQME-----LQQEQQLLQFNQIDMKKI-
Os011162_Os03t0 HFKK--ARPSR---RARAQLLHQYQLQQQQQHRQYLHSLNLLQQQQQQLQQQQQQQQQQ-
Os008808_Os02t0 HFKK--GKPSKNIERARARFL--------KQRRE-------MQQQSQLMQTGQQQQLGQD
                ****    *:.   ::: ::*        :*:*:       :**:.* :*  * :     

AT3G24310.1     --------------------MSLLDD-------------DN----NNGD------NTFSS
Os011162_Os03t0 --------------------MMLLQEQEQQSPQEEAAD-DSMVMMMMND---------LQ
Os008808_Os02t0 DDATSAVVDDNLAEVAPPAATSLTHDGELQIMQEMAPDMDDLLYYHPGDMSPYSYDDLLG
                                      * .:             *.      .*           

AT3G24310.1     SSSGESGALYVPHQITHSTTTSGCEPNSNGYYPVVPVTIPEANVNEDNAIWDGLWNLDFE
Os011162_Os03t0 SKERCCTAVSVVPDDCVLPADDD-------------------------AIWDSLWRLVDG
Os008808_Os02t0 SGGGECGAVAASAGAAASTSEGSSEELDGG-----------------AATWGSLWNLDDV
                *    . *: .       .: ..                         * *..**.*   

AT3G24310.1     ----------GQGSFGGAACAPR----KHYFQNMVIPFC
Os011162_Os03t0 ------DGSCGEGSSGGEYWATS----------------
Os008808_Os02t0 VHDMMIDCAAGAGCCWGSFPPLQDKGLAFY---------
                          * *.  *   .
BoxShade v3.31 C (beta, 970507) Output
AT3G24310.1     - - - - M S L W G G M G G G W G M V E E G W R K G P W T A E E D R L L I D Y V Q L H G E G R W N S V A R L A G L K R N G
Os011162_Os03t0    M D E I R S L M L Q Q - - - - - - - - - G W R K G P W T A L E D R L L T E Y V Q Q H G E G S W N S V A K L T G L R R S G
Os008808_Os02t0    - - - - - - M E G Q Q F - A W G R E E G G W R K G P W T A Q E D K L L V E Y V R Q H G E G R W N S V A K I T G L K R S G
 
AT3G24310.1     K S C R L R W V N Y L R P D L K R G Q I T P H E E T I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T
Os011162_Os03t0    K S C R L R W V N Y L R P D L K R G K I T P D E E T V I L Q L H A M L G N R W S A I A R C L P G R T D N E I K N Y W R T
Os008808_Os02t0    K S C R L R W V N Y L R P D L K R G K I T P Q E E S V I L E L H A L W G N R W S T I A R S L P G R T D N E I K N Y W R T
 
AT3G24310.1     H F K K K T K S P T N S A E K T K N R I L - - - K R Q Q F Q Q Q R Q M E - - - - - L Q Q E Q Q L L Q F N Q I D M K K I -
Os011162_Os03t0    H F K K - - A R P S R - - - R A R A Q L L H Q Y Q L Q Q Q Q Q H R Q Y L H S L N L L Q Q Q Q Q Q L Q Q Q Q Q Q Q Q Q Q -
Os008808_Os02t0    H F K K - - G K P S K N I E R A R A R F L - - - - - - - - K Q R R E - - - - - - - M Q Q Q S Q L M Q T G Q Q Q Q L G Q D
 
AT3G24310.1     - - - - - - - - - - - - - - - - - - - - M S L L D D - - - - - - - - - - - - - D N - - - - N N G D - - - - - - N T F S S
Os011162_Os03t0    - - - - - - - - - - - - - - - - - - - - M M L L Q E Q E Q Q S P Q E E A A D - D S M V M M M M N D - - - - - - - - - L Q
Os008808_Os02t0    D D A T S A V V D D N L A E V A P P A A T S L T H D G E L Q I M Q E M A P D M D D L L Y Y H P G D M S P Y S Y D D L L G
 
AT3G24310.1     S S S G E S G A L Y V P H Q I T H S T T T S G C E P N S N G Y Y P V V P V T I P E A N V N E D N A I W D G L W N L D F E
Os011162_Os03t0    S K E R C C T A V S V V P D D C V L P A D D D - - - - - - - - - - - - - - - - - - - - - - - - - A I W D S L W R L V D G
Os008808_Os02t0    S G G G E C G A V A A S A G A A A S T S E G S S E E L D G G - - - - - - - - - - - - - - - - - A A T W G S L W N L D D V
 
AT3G24310.1     - - - - - - - - - - G Q G S F G G A A C A P R - - - - K H Y F Q N M V I P F C
Os011162_Os03t0    - - - - - - D G S C G E G S S G G E Y W A T S - - - - - - - - - - - - - - - -
Os008808_Os02t0    V H D M M I D C A A G A G C C W G S F P P L Q D K G L A F Y - - - - - - - - -
 
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