fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010738 not found in 288aa AT4G13480.1 1st_not 0.488151658 II
Sb002608 not found in 253aa AT3G24310.1 not_1st 0.445497630 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G24310.1     MSLWGGMGG--GWGMVEEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKS
Sb010738_Sorbi1 ------MEGQFGWGREEGGWRKGPWTAQEDKLLVEYVRQHGEGRWNSVAKLTGLKRSGKS
Sb002608_Sorbi1 ------MDAISSLMLQE-GWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKS
                      * .  .    * ********* **:** :**: **** *****:*:**:*.***

AT3G24310.1     CRLRWVNYLRPDLKRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHF
Sb010738_Sorbi1 CRLRWVNYLRPDLKRGKITPQEESVILELHALWGNRWSTIARSLPGRTDNEIKNYWRTHF
Sb002608_Sorbi1 CRLRWVNYLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHF
                ****************:***.**::**:***  *****:***.*****************

AT3G24310.1     KKKTKSPTNSAEKTKNRIL----------KRQ--------QFQQQRQME-----------
Sb010738_Sorbi1 KK--GKPSKNIERARARFL--------KQRRE-MQSQLLLQGQDHHQQKEKQPDHHHDDD
Sb002608_Sorbi1 KK--ARPSR---RARAQLLHQYQLQQQEQRRQYLQSLQLLQQQQQQQQE-----------
                **    *:.   ::: ::*          :*:        * *:::* :           

AT3G24310.1     ---------------------LQQEQQLLQFNQIDMKK----------IMSLLDDDNNNG
Sb010738_Sorbi1 DDDDKDTSRDREAAAPAAVSLAQQNEEDLRMLQQD-----------------MDDLLFQ-
Sb002608_Sorbi1 ------------------MLLQQQNQQQLVVKQQQLEQQSPPESDHQAVMAMMDSLQSTA
                                      **::: * . * :                 :*.     

AT3G24310.1     DNTFSSSSSGESGALYV----PHQITHSTTTSGCEPNSNGYYPVVPVTIPEANVNEDNAI
Sb010738_Sorbi1 ---------------FC----PMAS--CTSSSCLLPGGGSCASVVSASASEEGSSGDHQL
Sb002608_Sorbi1 E-------------CYCSPVSPMMSVPVPEQCCALP-----------------ADDDAML
                               :     *      .  .   *                  . *  :

AT3G24310.1     -------WDGLWNLDFEGQGSFGGAACAPRKHYF---QNMVIPFC
Sb010738_Sorbi1 DGGATWGWGSLWNLD-DVVDDVDGGACGWDDSSFPLLQDQGLAFY
Sb002608_Sorbi1 -------WDSLWRL-------VDGEGCGDGDGS------SGGEY-
                       *..**.*       ..* .*.  .            :
BoxShade v3.31 C (beta, 970507) Output
AT3G24310.1     M S L W G G M G G - - G W G M V E E G W R K G P W T A E E D R L L I D Y V Q L H G E G R W N S V A R L A G L K R N G K S
Sb010738_Sorbi1    - - - - - - M E G Q F G W G R E E G G W R K G P W T A Q E D K L L V E Y V R Q H G E G R W N S V A K L T G L K R S G K S
Sb002608_Sorbi1    - - - - - - M D A I S S L M L Q E - G W R K G P W T A L E D R L L T E Y V Q Q H G E G S W N S V A K L T G L R R S G K S
 
AT3G24310.1     C R L R W V N Y L R P D L K R G Q I T P H E E T I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H F
Sb010738_Sorbi1    C R L R W V N Y L R P D L K R G K I T P Q E E S V I L E L H A L W G N R W S T I A R S L P G R T D N E I K N Y W R T H F
Sb002608_Sorbi1    C R L R W V N Y L R P D L K R G K I T P D E E T V I L Q L H A M L G N R W S A I A R C L P G R T D N E I K N Y W R T H F
 
AT3G24310.1     K K K T K S P T N S A E K T K N R I L - - - - - - - - - - K R Q - - - - - - - - Q F Q Q Q R Q M E - - - - - - - - - - -
Sb010738_Sorbi1    K K - - G K P S K N I E R A R A R F L - - - - - - - - K Q R R E - M Q S Q L L L Q G Q D H H Q Q K E K Q P D H H H D D D
Sb002608_Sorbi1    K K - - A R P S R - - - R A R A Q L L H Q Y Q L Q Q Q E Q R R Q Y L Q S L Q L L Q Q Q Q Q Q Q Q E - - - - - - - - - - -
 
AT3G24310.1     - - - - - - - - - - - - - - - - - - - - - L Q Q E Q Q L L Q F N Q I D M K K - - - - - - - - - - I M S L L D D D N N N G
Sb010738_Sorbi1    D D D D K D T S R D R E A A A P A A V S L A Q Q N E E D L R M L Q Q D - - - - - - - - - - - - - - - - - M D D L L F Q -
Sb002608_Sorbi1    - - - - - - - - - - - - - - - - - - M L L Q Q Q N Q Q Q L V V K Q Q Q L E Q Q S P P E S D H Q A V M A M M D S L Q S T A
 
AT3G24310.1     D N T F S S S S S G E S G A L Y V - - - - P H Q I T H S T T T S G C E P N S N G Y Y P V V P V T I P E A N V N E D N A I
Sb010738_Sorbi1    - - - - - - - - - - - - - - - F C - - - - P M A S - - C T S S S C L L P G G G S C A S V V S A S A S E E G S S G D H Q L
Sb002608_Sorbi1    E - - - - - - - - - - - - - C Y C S P V S P M M S V P V P E Q C C A L P - - - - - - - - - - - - - - - - - A D D D A M L
 
AT3G24310.1     - - - - - - - W D G L W N L D F E G Q G S F G G A A C A P R K H Y F - - - Q N M V I P F C
Sb010738_Sorbi1    D G G A T W G W G S L W N L D - D V V D D V D G G A C G W D D S S F P L L Q D Q G L A F Y
Sb002608_Sorbi1    - - - - - - - W D S L W R L - - - - - - - V D G E G C G D G D G S - - - - - - S G G E Y -
 
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