fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047286 not found in 265aa AT3G24310.1 1st_1st 0.571090047 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24310.1     MSLWGG-MGG--GWGMVEEG-WRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNG
gm047286_Glyma1 -MYWGEVMAGHVGRGVLEEEVWRKGPWTAEEDRLLVEYVRLHCEGRWNSVARLAGLKRNG
                   **  *.*  * *::**  **************::**:** *****************

AT3G24310.1     KSCRLRWVNYLRPDLKRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRT
gm047286_Glyma1 KSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRT
                **********************:**:*******:**************************

AT3G24310.1     HFKKKTKSPTNSAEKTKNRILKRQQF--QQQRQMELQQ----EQQLLQFNQIDMKKIMSL
gm047286_Glyma1 HFKKKAKSPSDAAEKARNRLMRKQQFHQQQQQQQQLQQQHRAQQQQMQFN-FDMKGIMAM
                *****:***:::***::**::::***  ***:* :***    :** :*** :*** **::

AT3G24310.1     LDDDNNNGDNTFSSSSSGESGALYVPHQITHSTTTSGCEPNSNGY-YPVV-----PVTIP
gm047286_Glyma1 LEDDIHR--TPYKSQSRQEMINM-------HQNTTE-----EQGYLYSMLNDNSSASSAP
                *:** :.  ..:.*.*  *   :       *..**.     .:** *.::     . : *

AT3G24310.1     EANVNEDNAIWDGLWNLDFEGQGSFGGAACAPRKHYFQNMVIPFC
gm047286_Glyma1 ETSAEE--VLWDGLWNID-DVHGNFSVASAASRFGLY-NLVAPFC
                *:..:*  .:******:* : :*.*. *:.*.*   : *:* ***
BoxShade v3.31 C (beta, 970507) Output
AT3G24310.1     M S L W G G - M G G - - G W G M V E E G - W R K G P W T A E E D R L L I D Y V Q L H G E G R W N S V A R L A G L K R N G
gm047286_Glyma1    - M Y W G E V M A G H V G R G V L E E E V W R K G P W T A E E D R L L V E Y V R L H C E G R W N S V A R L A G L K R N G
 
AT3G24310.1     K S C R L R W V N Y L R P D L K R G Q I T P H E E T I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T
gm047286_Glyma1    K S C R L R W V N Y L R P D L K R G Q I T P Q E E S I I L E L H A R W G N R W S T I A R S L P G R T D N E I K N Y W R T
 
AT3G24310.1     H F K K K T K S P T N S A E K T K N R I L K R Q Q F - - Q Q Q R Q M E L Q Q - - - - E Q Q L L Q F N Q I D M K K I M S L
gm047286_Glyma1    H F K K K A K S P S D A A E K A R N R L M R K Q Q F H Q Q Q Q Q Q Q Q L Q Q Q H R A Q Q Q Q M Q F N - F D M K G I M A M
 
AT3G24310.1     L D D D N N N G D N T F S S S S S G E S G A L Y V P H Q I T H S T T T S G C E P N S N G Y - Y P V V - - - - - P V T I P
gm047286_Glyma1    L E D D I H R - - T P Y K S Q S R Q E M I N M - - - - - - - H Q N T T E - - - - - E Q G Y L Y S M L N D N S S A S S A P
 
AT3G24310.1     E A N V N E D N A I W D G L W N L D F E G Q G S F G G A A C A P R K H Y F Q N M V I P F C
gm047286_Glyma1    E T S A E E - - V L W D G L W N I D - D V H G N F S V A S A A S R F G L Y - N L V A P F C
 
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