fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025315 not found in 320aa AT3G24520.1 1st_1st 0.463503649 Ia
Pt008500 not found in 339aa AT3G24520.1 1st_1st 0.5 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G24520.1     -MEDDNSNNN---NNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRI
gm025315_Glyma0 MME-----HNIIVNNNNVIAPFVIKTYNMVNDPTTDKLIMWGPANNSFIVLDPLDFSHSL
pt008500_POPTR_ MME-----AN---NNNNIVAPFVLKIYQMVSDPTTDSLISWGRANNSFIVIDPLDFSQRI
                 **      *   ****::***::* *:**.**:** ** ** *:*****:******: :

AT3G24520.1     LPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARG----
gm025315_Glyma0 LPAFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLRNIARRKHGGAGRSN
pt008500_POPTR_ LPVYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKQLLKNIVRRKHSSNNKGS
                **.:******************************* ******:**.**.****.      

AT3G24520.1     ---------MYGQDLEDGEIVREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLY
gm025315_Glyma0 FNLHSHHHPLKVEELDDEAMVMEIARLKEEQKALEEELQGMNKRLETTEKRPQQMMAFLS
pt008500_POPTR_ SYMQVN---IKGEDFDDEDIIMEIARLKQEQKALEQELEGMNKRLEATERRPQQMMAFIY
                         :  ::::*  :: ** ***:**: ** *:: **:*:*:**:**:*****: 

AT3G24520.1     KVVEDPDLLPRMMLEKERTKQQQQVSDKKKRRVTMSTVKSEE------------EEVEED
gm025315_Glyma0 KVVEDPQVLSRILREREK----KHLGEKKRRLIPPPTTTAAT--TSSSSSSGIKTEFEED
pt008500_POPTR_ KVVEDPDLLPRMILEKERT---RQIKDKKQRLMISSSATSPSGMAISSTSTIIKSEVVHE
                ******::*.*:: *:*:    ::: :**:* :  .:..:               *. .:

AT3G24520.1     EGRVFRVMSSSTPSPSSTENLYRNH--SPD---------GWIVPMTQGQFG-------SY
gm025315_Glyma0 EGN-YNIMSS---SPETGLEIDNNNICSP------LAAGYW---GEQGCHG--------Y
pt008500_POPTR_ EGS-IGVI-S---SPETVFNVDKFCQSSPSPDESDINAIGW---LDQVNYGLAVAGPSPF
                **    :: *   **.:  :: .    **           *     *  .*        :

AT3G24520.1     ETGLVAKSMLSNSTSSTSSSLTSTFS-LPESVNGGGGGGCGSIQGE--RRYKETATFGGV
gm025315_Glyma0 NRG------------AVTAPLTVVAPAVPTM--GGGYLGRG-------VFFGEMAA----
pt008500_POPTR_ TTG------------SMGAGIGATVAVLPQG--NSTVIGYGGDWGDHINYFGEMAAG---
                  *            :  : :  . . :*    ..   * *         : * *:    

AT3G24520.1     VESNPPTTPPYPFSLFRGGF
gm025315_Glyma0 -EGNA--VPPYPFSLLEGGF
pt008500_POPTR_ VEDRP--RPSYPFSLLGGGF
                 *...   *.*****: ***
BoxShade v3.31 C (beta, 970507) Output
AT3G24520.1     - M E D D N S N N N - - - N N N N V I A P F I V K T Y Q M V N D P S T D W L I T W G P A H N S F I V V D P L D F S Q R I
gm025315_Glyma0    M M E - - - - - H N I I V N N N N V I A P F V I K T Y N M V N D P T T D K L I M W G P A N N S F I V L D P L D F S H S L
pt008500_POPTR_    M M E - - - - - A N - - - N N N N I V A P F V L K I Y Q M V S D P T T D S L I S W G R A N N S F I V I D P L D F S Q R I
 
AT3G24520.1     L P A Y F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E H F L R G Q K H L L N N I A R R K H A R G - - - -
gm025315_Glyma0    L P A F F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E W F L R G Q K H L L R N I A R R K H G G A G R S N
pt008500_POPTR_    L P V Y F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E W F L R G Q K Q L L K N I V R R K H S S N N K G S
 
AT3G24520.1     - - - - - - - - - M Y G Q D L E D G E I V R E I E R L K E E Q R E L E A E I Q R M N R R I E A T E K R P E Q M M A F L Y
gm025315_Glyma0    F N L H S H H H P L K V E E L D D E A M V M E I A R L K E E Q K A L E E E L Q G M N K R L E T T E K R P Q Q M M A F L S
pt008500_POPTR_    S Y M Q V N - - - I K G E D F D D E D I I M E I A R L K Q E Q K A L E Q E L E G M N K R L E A T E R R P Q Q M M A F I Y
 
AT3G24520.1     K V V E D P D L L P R M M L E K E R T K Q Q Q Q V S D K K K R R V T M S T V K S E E - - - - - - - - - - - - E E V E E D
gm025315_Glyma0    K V V E D P Q V L S R I L R E R E K - - - - K H L G E K K R R L I P P P T T T A A T - - T S S S S S S G I K T E F E E D
pt008500_POPTR_    K V V E D P D L L P R M I L E K E R T - - - R Q I K D K K Q R L M I S S S A T S P S G M A I S S T S T I I K S E V V H E
 
AT3G24520.1     E G R V F R V M S S S T P S P S S T E N L Y R N H - - S P D - - - - - - - - - G W I V P M T Q G Q F G - - - - - - - S Y
gm025315_Glyma0    E G N - Y N I M S S - - - S P E T G L E I D N N N I C S P - - - - - - L A A G Y W - - - G E Q G C H G - - - - - - - - Y
pt008500_POPTR_    E G S - I G V I - S - - - S P E T V F N V D K F C Q S S P S P D E S D I N A I G W - - - L D Q V N Y G L A V A G P S P F
 
AT3G24520.1     E T G L V A K S M L S N S T S S T S S S L T S T F S - L P E S V N G G G G G G C G S I Q G E - - R R Y K E T A T F G G V
gm025315_Glyma0    N R G - - - - - - - - - - - - A V T A P L T V V A P A V P T M - - G G G Y L G R G - - - - - - - V F F G E M A A - - - -
pt008500_POPTR_    T T G - - - - - - - - - - - - S M G A G I G A T V A V L P Q G - - N S T V I G Y G G D W G D H I N Y F G E M A A G - - -
 
AT3G24520.1     V E S N P P T T P P Y P F S L F R G G F
gm025315_Glyma0    - E G N A - - V P P Y P F S L L E G G F
pt008500_POPTR_    V E D R P - - R P S Y P F S L L G G G F
 
0