fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027025 not found in 388aa AT3G24520.1 1st_1st 0.357664233 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24520.1     --MEDDNSNNNNNNNVIAPFIVKT---------YQMVNDPSTDWLITWGPAHNSFI--VV
Sb027025_Sorbi1 GATNDDEARTRRQATTAPPSVAAVDGEHVRRWLQQVIGEPNV-----------CFVSGAT
                   :**::....: .. .* :. .          *::.:*..           .*:  ..

AT3G24520.1     DPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARR
Sb027025_Sorbi1 EPAEVDGAVATA---------------AAGVQK-QPRPLDVGGVLRLRGGGGVV------
                :* :..  : .*               : *.:* :*   :...   ***   ::      

AT3G24520.1     KHARGMYGQDLEDGEIVREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVE
Sb027025_Sorbi1 --GPGGGGAGDEAAQHLRVARDLDEEREHLLGPPLRL---LHAAPHRGHLLL--------
                  . *  * . * .: :*  . *.**:..* .   *:   :.*: :* . ::        

AT3G24520.1     DPDLLPRMMLEKERTKQQQQVSDKKKRRVTMSTVKSEEEEVEEDEGRVFRVMSSSTPSPS
Sb027025_Sorbi1 DRSLLP-----------PQPDHLHGHRRVVLVHAAAA-------AAVVLIALAAVAAAAA
                * .***            *    : :***.:  . :         . *: .::: :.:.:

AT3G24520.1     STENLYRNHSPDGWIVPMTQGQFGSYETGLVAKSMLSNSTSSTSSSLTSTFSLPESV---
Sb027025_Sorbi1 PADDL-------------------AQEVRLPAQERHVRELPPVR------IHLPEAVGVE
                .:::*                   : *. * *:.   .. ...       : ***:*   

AT3G24520.1     --NGGGGGGCGSIQGERRYKETATFGGVVESNPPTTPPYPFSLFRGGF------------
Sb027025_Sorbi1 LADEAGEVGVLEVRGQERLREDERVG----DDEAVAVPAPRDDGVGGRVVHHAVRLGHER
                  : .*  *  .::*:.* :*   .*    .: ..: * * .   **             

AT3G24520.1     ---------------
Sb027025_Sorbi1 RHTAGRVHAGAAGRH
BoxShade v3.31 C (beta, 970507) Output
AT3G24520.1     - - M E D D N S N N N N N N N V I A P F I V K T - - - - - - - - - Y Q M V N D P S T D W L I T W G P A H N S F I - - V V
Sb027025_Sorbi1    G A T N D D E A R T R R Q A T T A P P S V A A V D G E H V R R W L Q Q V I G E P N V - - - - - - - - - - - C F V S G A T
 
AT3G24520.1     D P L D F S Q R I L P A Y F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E H F L R G Q K H L L N N I A R R
Sb027025_Sorbi1    E P A E V D G A V A T A - - - - - - - - - - - - - - - A A G V Q K - Q P R P L D V G G V L R L R G G G G V V - - - - - -
 
AT3G24520.1     K H A R G M Y G Q D L E D G E I V R E I E R L K E E Q R E L E A E I Q R M N R R I E A T E K R P E Q M M A F L Y K V V E
Sb027025_Sorbi1    - - G P G G G G A G D E A A Q H L R V A R D L D E E R E H L L G P P L R L - - - L H A A P H R G H L L L - - - - - - - -
 
AT3G24520.1     D P D L L P R M M L E K E R T K Q Q Q Q V S D K K K R R V T M S T V K S E E E E V E E D E G R V F R V M S S S T P S P S
Sb027025_Sorbi1    D R S L L P - - - - - - - - - - - P Q P D H L H G H R R V V L V H A A A A - - - - - - - A A V V L I A L A A V A A A A A
 
AT3G24520.1     S T E N L Y R N H S P D G W I V P M T Q G Q F G S Y E T G L V A K S M L S N S T S S T S S S L T S T F S L P E S V - - -
Sb027025_Sorbi1    P A D D L - - - - - - - - - - - - - - - - - - - A Q E V R L P A Q E R H V R E L P P V R - - - - - - I H L P E A V G V E
 
AT3G24520.1     - - N G G G G G G C G S I Q G E R R Y K E T A T F G G V V E S N P P T T P P Y P F S L F R G G F - - - - - - - - - - - -
Sb027025_Sorbi1    L A D E A G E V G V L E V R G Q E R L R E D E R V G - - - - D D E A V A V P A P R D D G V G G R V V H H A V R L G H E R
 
AT3G24520.1     - - - - - - - - - - - - - - -
Sb027025_Sorbi1    R H T A G R V H A G A A G R H
 
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