fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G24520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025315 not found in 320aa AT3G24520.1 1st_1st 0.463503649 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G24520.1     -MEDDNSNNN---NNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRI
gm025315_Glyma0 MME-----HNIIVNNNNVIAPFVIKTYNMVNDPTTDKLIMWGPANNSFIVLDPLDFSHSL
                 **     :*   *********::***:*****:** ** ****:*****:******: :

AT3G24520.1     LPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKH---ARGM
gm025315_Glyma0 LPAFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLRNIARRKHGGAGRSN
                ***:******************************* *********.*******   .*. 

AT3G24520.1     YG----------QDLEDGEIVREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLY
gm025315_Glyma0 FNLHSHHHPLKVEELDDEAMVMEIARLKEEQKALEEELQGMNKRLETTEKRPQQMMAFLS
                :.          ::*:*  :* ** ******: ** *:* **:*:*:*****:****** 

AT3G24520.1     KVVEDPDLLPRMMLEKERTKQQQQVSDKKKRRV-----TMSTVKSE-----EEEVEEDEG
gm025315_Glyma0 KVVEDPQVLSRILREREK----KHLGEKKRRLIPPPTTTAATTSSSSSSGIKTEFEEDEG
                ******::*.*:: *:*:    :::.:**:* :     * :*..*.     : *.*****

AT3G24520.1     RVFRVMSSSTPSPSSTENLYRNHSPDGWIVPMTQGQFGS-----YETGLVAKSMLSNSTS
gm025315_Glyma0 N-YNIMSSSPETGLEIDN-------NNICSPLAAGYWGEQGCHGYNRGAVTAPL------
                . :.:****. :  . :*       :.   *:: * :*.     *: * *: .:      

AT3G24520.1     STSSSLTSTFSLPESVNGGGGGGCGSIQGERRYKETATFGGVVESNPPTTPPYPFSLFRG
gm025315_Glyma0 --------TVVAPAVPTMGGG-----------YLGRGVFFGEMAAEGNAVPPYPFSLLEG
                        *.  *   . ***           *   ..* * : ::  :.*******:.*

AT3G24520.1     GF
gm025315_Glyma0 GF
                **
BoxShade v3.31 C (beta, 970507) Output
AT3G24520.1     - M E D D N S N N N - - - N N N N V I A P F I V K T Y Q M V N D P S T D W L I T W G P A H N S F I V V D P L D F S Q R I
gm025315_Glyma0    M M E - - - - - H N I I V N N N N V I A P F V I K T Y N M V N D P T T D K L I M W G P A N N S F I V L D P L D F S H S L
 
AT3G24520.1     L P A Y F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E H F L R G Q K H L L N N I A R R K H - - - A R G M
gm025315_Glyma0    L P A F F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E W F L R G Q K H L L R N I A R R K H G G A G R S N
 
AT3G24520.1     Y G - - - - - - - - - - Q D L E D G E I V R E I E R L K E E Q R E L E A E I Q R M N R R I E A T E K R P E Q M M A F L Y
gm025315_Glyma0    F N L H S H H H P L K V E E L D D E A M V M E I A R L K E E Q K A L E E E L Q G M N K R L E T T E K R P Q Q M M A F L S
 
AT3G24520.1     K V V E D P D L L P R M M L E K E R T K Q Q Q Q V S D K K K R R V - - - - - T M S T V K S E - - - - - E E E V E E D E G
gm025315_Glyma0    K V V E D P Q V L S R I L R E R E K - - - - K H L G E K K R R L I P P P T T T A A T T S S S S S S G I K T E F E E D E G
 
AT3G24520.1     R V F R V M S S S T P S P S S T E N L Y R N H S P D G W I V P M T Q G Q F G S - - - - - Y E T G L V A K S M L S N S T S
gm025315_Glyma0    N - Y N I M S S S P E T G L E I D N - - - - - - - N N I C S P L A A G Y W G E Q G C H G Y N R G A V T A P L - - - - - -
 
AT3G24520.1     S T S S S L T S T F S L P E S V N G G G G G G C G S I Q G E R R Y K E T A T F G G V V E S N P P T T P P Y P F S L F R G
gm025315_Glyma0    - - - - - - - - T V V A P A V P T M G G G - - - - - - - - - - - Y L G R G V F F G E M A A E G N A V P P Y P F S L L E G
 
AT3G24520.1     G F
gm025315_Glyma0    G F
 
0