fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G25730.1 TGRVMRLFGVDISLN at 299/333 in AT3G25730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042964 PIQMVRLFGVNIFNV in 325/369 AT1G25560.1 1st_not 0.564742589 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G25730.1     MDAMSSVDESST--TTDSI------------PARKSSSPASLLYRMGSGTSVVLDSENGV
pt042964_POPTR_ MDG-SCVDESTTSSTDNSISITPTSLTPSPPPATTTKSPPESLCRVGSGNSVILDLELG-
                **. *.****:*  * :**            ** .:.**.. * *:***.**:** * * 

AT3G25730.1     EVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRF
pt042964_POPTR_ ---VEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDTAAQRF
                   ***********::**************************************.**:**

AT3G25730.1     RGRDAVTNFK--DTTFEEEVE--FLNAHSKSEIVDMLRKHTYKEELDQRKRN-RDGNG--
pt042964_POPTR_ RGRDAVTNFKQVNETEDDEIEAAFLITHSKAEIVDMLRKHTYSDELEQSKRNQRSNNGVN
                **********  : * ::*:*  ** :***:***********.:**:* *** *..**  

AT3G25730.1     ----KETTAFALASMVVMTG--FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPL
pt042964_POPTR_ GKQYKNTANYGSNSYDHGCGRVLKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ-
                    *:*: :.  *     *  :*: * ****:****************::*******  

AT3G25730.1     GNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKR
pt042964_POPTR_ STSSCSTKGVLLNLEDMSGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVCFQR
                .... *.**:***:**:.****************************** * ***::.*:*

AT3G25730.1     SNDQDQKFFIGWKSKSGLD----LETGRVMRLFGVDI--------SLNAVVVVKETTEVL
pt042964_POPTR_ STGPDKQLYIDWKARSGSNQVQPVQPIQMVRLFGVNIFNVPGMENGCNGKRSVREMELLS
                *.. *::::*.**::** :    ::. :::*****:*        . *.   *:*   : 

AT3G25730.1     MSSLRCKKQRVL---
pt042964_POPTR_ LDHQYSKKQRIIGAL
                :.   .****::
BoxShade v3.31 C (beta, 970507) Output
AT3G25730.1     M D A M S S V D E S S T - - T T D S I - - - - - - - - - - - - P A R K S S S P A S L L Y R M G S G T S V V L D S E N G V
pt042964_POPTR_    M D G - S C V D E S T T S S T D N S I S I T P T S L T P S P P P A T T T K S P P E S L C R V G S G N S V I L D L E L G -
 
AT3G25730.1     E V E V E A E S R K L P S S R F K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D V A A H R F
pt042964_POPTR_    - - - V E A E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D T A A Q R F
 
AT3G25730.1     R G R D A V T N F K - - D T T F E E E V E - - F L N A H S K S E I V D M L R K H T Y K E E L D Q R K R N - R D G N G - -
pt042964_POPTR_    R G R D A V T N F K Q V N E T E D D E I E A A F L I T H S K A E I V D M L R K H T Y S D E L E Q S K R N Q R S N N G V N
 
AT3G25730.1     - - - - K E T T A F A L A S M V V M T G - - F K T A E L L F E K T V T P S D V G K L N R L V I P K H Q A E K H F P L P L
pt042964_POPTR_    G K Q Y K N T A N Y G S N S Y D H G C G R V L K A R E Q L F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q -
 
AT3G25730.1     G N N N V S V K G M L L N F E D V N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K R L C A G D L I S F K R
pt042964_POPTR_    S T S S C S T K G V L L N L E D M S G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K S L K A G D I V C F Q R
 
AT3G25730.1     S N D Q D Q K F F I G W K S K S G L D - - - - L E T G R V M R L F G V D I - - - - - - - - S L N A V V V V K E T T E V L
pt042964_POPTR_    S T G P D K Q L Y I D W K A R S G S N Q V Q P V Q P I Q M V R L F G V N I F N V P G M E N G C N G K R S V R E M E L L S
 
AT3G25730.1     M S S L R C K K Q R V L - - -
pt042964_POPTR_    L D H Q Y S K K Q R I I G A L
 
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