fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G25730.1 TGRVMRLFGVDISLN at 299/333 in AT3G25730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035978 PVQMVRLFGVNIFNV in 357/401 AT1G25560.1 not_not 0.561622464 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G25730.1     ----------------------------------MDAMSSVDESST---------TTDSI
pt035978_POPTR_ MPLSLVNKNTSSISLSFSFSLAPPSFTTTTRKKNMDG-SCIDESTTSSADNSISITPTSL
                                                  **. *.:***:*         *. *:

AT3G25730.1     P-----ARKSSSPASLLYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNG
pt035978_POPTR_ PPFPPTATTTKSPPESLCRVRSGNSSVILDSESG----VEAESRKLPSSKYKGVVPQPNG
                *     * .:.**.. * *: ** :**:****.*    ***********::*********

AT3G25730.1     RWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFK--DTTFEEEVE--FL
pt035978_POPTR_ RWGAQIYEKHQRVWLGTFNEENEAARAYDIAAQRFRGRDAVTNFKQVNETEDDEIEAAFL
                *********************:*******:**:************  : * ::*:*  **

AT3G25730.1     NAHSKSEIVDMLRKHTYKEELDQRKRNR----DGNGK--------ETTAFALASMVVMTG
pt035978_POPTR_ NAHSKAEIVDMLRKHTYSDELEQSKRNHRSNNGGNGKQYKNTANYENNSYDHGCGRVL--
                *****:***********.:**:* ***:    .****        *..::  ..  *:  

AT3G25730.1     FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW
pt035978_POPTR_ -KAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSN-STKGVLLNLEDVSGKVW
                 *: * ****:****************::*******   ..* *.**:***:***.****

AT3G25730.1     RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLD-LE
pt035978_POPTR_ RFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVCFQRSTGPDNQLYIDWKARCGSNQVQ
                **************************.* ***::.*:**.. *::::*.**::.* : ::

AT3G25730.1     TGRVMRLFGVDI--------SLNAVVVVKETTEVLMSSLRCKKQRVL---
pt035978_POPTR_ PVQMVRLFGVNIFNVPGMENGCDGKRSIRDMELLSIDRQYSKKQRIVGAL
                . :::*****:*        . :.   :::   : :.   .****::
BoxShade v3.31 C (beta, 970507) Output
AT3G25730.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D A M S S V D E S S T - - - - - - - - - T T D S I
pt035978_POPTR_    M P L S L V N K N T S S I S L S F S F S L A P P S F T T T T R K K N M D G - S C I D E S T T S S A D N S I S I T P T S L
 
AT3G25730.1     P - - - - - A R K S S S P A S L L Y R M G S G - T S V V L D S E N G V E V E V E A E S R K L P S S R F K G V V P Q P N G
pt035978_POPTR_    P P F P P T A T T T K S P P E S L C R V R S G N S S V I L D S E S G - - - - V E A E S R K L P S S K Y K G V V P Q P N G
 
AT3G25730.1     R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D V A A H R F R G R D A V T N F K - - D T T F E E E V E - - F L
pt035978_POPTR_    R W G A Q I Y E K H Q R V W L G T F N E E N E A A R A Y D I A A Q R F R G R D A V T N F K Q V N E T E D D E I E A A F L
 
AT3G25730.1     N A H S K S E I V D M L R K H T Y K E E L D Q R K R N R - - - - D G N G K - - - - - - - - E T T A F A L A S M V V M T G
pt035978_POPTR_    N A H S K A E I V D M L R K H T Y S D E L E Q S K R N H R S N N G G N G K Q Y K N T A N Y E N N S Y D H G C G R V L - -
 
AT3G25730.1     F K T A E L L F E K T V T P S D V G K L N R L V I P K H Q A E K H F P L P L G N N N V S V K G M L L N F E D V N G K V W
pt035978_POPTR_    - K A R E Q L F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q S T S S N - S T K G V L L N L E D V S G K V W
 
AT3G25730.1     R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K R L C A G D L I S F K R S N D Q D Q K F F I G W K S K S G L D - L E
pt035978_POPTR_    R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L K A G D I V C F Q R S T G P D N Q L Y I D W K A R C G S N Q V Q
 
AT3G25730.1     T G R V M R L F G V D I - - - - - - - - S L N A V V V V K E T T E V L M S S L R C K K Q R V L - - -
pt035978_POPTR_    P V Q M V R L F G V N I F N V P G M E N G C D G K R S I R D M E L L S I D R Q Y S K K Q R I V G A L
 
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