fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G25730.1 TGRVMRLFGVDISLN at 299/333 in AT3G25730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001006 PIQMVRLFGVNILKL in 335/384 AT1G25560.1 1st_not 0.546021840 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G25730.1     MDAMSSVDESSTTTD-SIPARKSSS-------------PASLLYRMGSGTSVVLDSE-NG
gm001006_Glyma0 MDAISCLDESTTTESLSISQAKPSSTIMSSEKASPSPPPPNRLCRVGSGASAVVDSDGGG
                ***:*.:***:** . **.  *.**             *.. * *:***:*.*:**: .*

AT3G25730.1     VEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHR
gm001006_Glyma0 GGGSTEVESRKLPSSKYKGVVPQPNGRWGSQIYEKHQRVWLGTFNEEDEAARAYDVAVQR
                   ..*.********::************:***************************.:*

AT3G25730.1     FRGRDAVTNFKDTTFEE----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRD-----
gm001006_Glyma0 FRGKDAVTNFKPLSGTDDDDGESEFLNSHSKSEIVDMLRKHTYNDELEQSKRSRGFVRRR
                ***:*******  :  :    * ****:***************::**:* **.*.     

AT3G25730.1     ------GNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFP
gm001006_Glyma0 GSAAGAGNGN-----SISGACVM---KAREQLFQKAVTPSDVGKLNRLVIPKQHAEKHFP
                      ***:     :::.  **   *: * **:*:****************::******

AT3G25730.1     LPLGNNNVS-----VKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCA
gm001006_Glyma0 LQSAANGVSATATAAKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKA
                *  . *.**     .**:*******.******************************.* *

AT3G25730.1     GDLISFKRSNDQDQKFFIGWKSKS--------GLDLETGRVMRLFGVDI-----------
gm001006_Glyma0 GDTVCFQRSTGPDRQLYIDWKTRNVVNEVALFGPVVEPIQMVRLFGVNILKLPGSDSIAN
                ** :.*:**.. *::::*.**::.        *  :*. :::*****:*           

AT3G25730.1     SLNAVVVVK-ETTEVLMSSLRC-KKQRVL---
gm001006_Glyma0 NNNASGCCNGKRREMELFSLECSKKPKIIGAL
                . **    : :  *: : **.* ** :::
BoxShade v3.31 C (beta, 970507) Output
AT3G25730.1     M D A M S S V D E S S T T T D - S I P A R K S S S - - - - - - - - - - - - - P A S L L Y R M G S G T S V V L D S E - N G
gm001006_Glyma0    M D A I S C L D E S T T T E S L S I S Q A K P S S T I M S S E K A S P S P P P P N R L C R V G S G A S A V V D S D G G G
 
AT3G25730.1     V E V E V E A E S R K L P S S R F K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D V A A H R
gm001006_Glyma0    G G G S T E V E S R K L P S S K Y K G V V P Q P N G R W G S Q I Y E K H Q R V W L G T F N E E D E A A R A Y D V A V Q R
 
AT3G25730.1     F R G R D A V T N F K D T T F E E - - - - E V E F L N A H S K S E I V D M L R K H T Y K E E L D Q R K R N R D - - - - -
gm001006_Glyma0    F R G K D A V T N F K P L S G T D D D D G E S E F L N S H S K S E I V D M L R K H T Y N D E L E Q S K R S R G F V R R R
 
AT3G25730.1     - - - - - - G N G K E T T A F A L A S M V V M T G F K T A E L L F E K T V T P S D V G K L N R L V I P K H Q A E K H F P
gm001006_Glyma0    G S A A G A G N G N - - - - - S I S G A C V M - - - K A R E Q L F Q K A V T P S D V G K L N R L V I P K Q H A E K H F P
 
AT3G25730.1     L P L G N N N V S - - - - - V K G M L L N F E D V N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K R L C A
gm001006_Glyma0    L Q S A A N G V S A T A T A A K G V L L N F E D V G G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L K A
 
AT3G25730.1     G D L I S F K R S N D Q D Q K F F I G W K S K S - - - - - - - - G L D L E T G R V M R L F G V D I - - - - - - - - - - -
gm001006_Glyma0    G D T V C F Q R S T G P D R Q L Y I D W K T R N V V N E V A L F G P V V E P I Q M V R L F G V N I L K L P G S D S I A N
 
AT3G25730.1     S L N A V V V V K - E T T E V L M S S L R C - K K Q R V L - - -
gm001006_Glyma0    N N N A S G C C N G K R R E M E L F S L E C S K K P K I I G A L
 
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