fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028497 not found in 171aa AT1G31320.1 1st_not 0.529411764 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26620.1     -----MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPD
pp028497_Pp1s23 MAGSGMSP--CAACKLLRRRCTRDCVFAPYFPPDEPQKFANVHKVFGAANVNKMLQELPV
                     *.*  ***** *****.:****:*****::***** **:::**.**.****:** 

AT3G26620.1     QTRAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQT-----
pp028497_Pp1s23 EARGDAVSSMVYEADARVRDPVYGCVGAISSLQQQVAHLQTQLAVANAEIVCMRIHNTES
                ::*.:**.*: :**..** ******** *  *: *: : *.:** ::***.  :      

AT3G26620.1     ----------------------------------------KLSQTHISDFM--
pp028497_Pp1s23 SSDCGTPHHMQGSYQQGLSPPLQPQSPELHHYHKPTAYYHRMDNSELAELLWT
                                                        ::.::.:::::
BoxShade v3.31 C (beta, 970507) Output
AT3G26620.1     - - - - - M N P K R C A A C K Y L R R R C P K D C V F S P Y F P P N D P Q K F A C V H R I Y G A G N V S K M L Q Q L P D
pp028497_Pp1s23    M A G S G M S P - - C A A C K L L R R R C T R D C V F A P Y F P P D E P Q K F A N V H K V F G A A N V N K M L Q E L P V
 
AT3G26620.1     Q T R A E A V E S L C F E A K C R V D D P V Y G C V G I I H L L K T Q I Q K T Q N E L A K T Q A E I A V A Q T - - - - -
pp028497_Pp1s23    E A R G D A V S S M V Y E A D A R V R D P V Y G C V G A I S S L Q Q Q V A H L Q T Q L A V A N A E I V C M R I H N T E S
 
AT3G26620.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K L S Q T H I S D F M - -
pp028497_Pp1s23    S S D C G T P H H M Q G S Y Q Q G L S P P L Q P Q S P E L H H Y H K P T A Y Y H R M D N S E L A E L L W T
 
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