fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023662 not found in 154aa AT3G26660.1 1st_not 0.631372549 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26620.1     MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE
pt023662_POPTR_ MISGRCAACKYLRRRCPSDCIFSPYFPSNNPQRFACVHRIYGASNVAKMLQQLPAHLRAE
                * . *************.**:******.*:**:**********.**:******* : ***

AT3G26620.1     AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAV--------AQTK-
pt023662_POPTR_ AANSLYYEAQSRTQDPVYGCVGIISLLHQQIHGVESQLAKTKAEIAVLNSLAQEPAQIQE
                *.:** :**:.*.:********** **: **: .:.:****:*****        ** : 

AT3G26620.1     -----------LSQTHI-------------SDFM
pt023662_POPTR_ NEVEASFNHFLLEQDNIASGQYFSHSTCIPSNFM
                           *.* :*             *:**
BoxShade v3.31 C (beta, 970507) Output
AT3G26620.1     M N P K R C A A C K Y L R R R C P K D C V F S P Y F P P N D P Q K F A C V H R I Y G A G N V S K M L Q Q L P D Q T R A E
pt023662_POPTR_    M I S G R C A A C K Y L R R R C P S D C I F S P Y F P S N N P Q R F A C V H R I Y G A S N V A K M L Q Q L P A H L R A E
 
AT3G26620.1     A V E S L C F E A K C R V D D P V Y G C V G I I H L L K T Q I Q K T Q N E L A K T Q A E I A V - - - - - - - - A Q T K -
pt023662_POPTR_    A A N S L Y Y E A Q S R T Q D P V Y G C V G I I S L L H Q Q I H G V E S Q L A K T K A E I A V L N S L A Q E P A Q I Q E
 
AT3G26620.1     - - - - - - - - - - - L S Q T H I - - - - - - - - - - - - - S D F M
pt023662_POPTR_    N E V E A S F N H F L L E Q D N I A S G Q Y F S H S T C I P S N F M
 
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