fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018408 not found in 217aa AT2G30130.1 1st_not 0.537254901 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26620.1     ---MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQT
Sb018408_Sorbi1 MGGGSP--CASCKLLRRRCTKDCIFAPFFPADDPHKFAIVHKVFGASNVSKMLQELPVQQ
                    .*  **:** *****.***:*:*:**.:**:*** **:::**.*******:** * 

AT3G26620.1     RAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTK------
Sb018408_Sorbi1 RGDAVSSLVYEANARMRDPVYGCVGAISFLQNQVSQLQMQLAVAQAEILCIQMQRRDDVD
                *.:**.** :**:.*: ******** * :*:.*:.: * :** :****   * :      

AT3G26620.1     ----------------------------------------------LSQTHISDFM----
Sb018408_Sorbi1 GGGGGPNVDDVVVPPPSSLVVGAGGGADHRHHNHMTMAAAMQQQAMMATDDVDAFLMQNG
                                                              ::  .:. *:    

AT3G26620.1     ---------------------------------------
Sb018408_Sorbi1 AGATGAIVPPQLIGMGYGGAASAGAMGETTALKRESLWT
BoxShade v3.31 C (beta, 970507) Output
AT3G26620.1     - - - M N P K R C A A C K Y L R R R C P K D C V F S P Y F P P N D P Q K F A C V H R I Y G A G N V S K M L Q Q L P D Q T
Sb018408_Sorbi1    M G G G S P - - C A S C K L L R R R C T K D C I F A P F F P A D D P H K F A I V H K V F G A S N V S K M L Q E L P V Q Q
 
AT3G26620.1     R A E A V E S L C F E A K C R V D D P V Y G C V G I I H L L K T Q I Q K T Q N E L A K T Q A E I A V A Q T K - - - - - -
Sb018408_Sorbi1    R G D A V S S L V Y E A N A R M R D P V Y G C V G A I S F L Q N Q V S Q L Q M Q L A V A Q A E I L C I Q M Q R R D D V D
 
AT3G26620.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S Q T H I S D F M - - - -
Sb018408_Sorbi1    G G G G G P N V D D V V V P P P S S L V V G A G G G A D H R H H N H M T M A A A M Q Q Q A M M A T D D V D A F L M Q N G
 
AT3G26620.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb018408_Sorbi1    A G A T G A I V P P Q L I G M G Y G G A A S A G A M G E T T A L K R E S L W T
 
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