fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005177 not found in 154aa AT2G30130.1 1st_not 0.549019607 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26620.1     ---MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQT
gm005177_Glyma0 MGGNSP--CASCKLLRRRCTKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQ
                    .*  **:** *****.***:*:****.:****** **:::**.*******:** : 

AT3G26620.1     RAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTK------
gm005177_Glyma0 RADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMEHEPVMP
                **:**.** :**:.** ******** *  *:.*:.: * :** :****   * :      

AT3G26620.1     ------------LSQTHISDFM--------------
gm005177_Glyma0 AASGIDLDYKSYFLQNDLSQFLGFDTSSNVMQQFCP
                            : *..:*:*:
BoxShade v3.31 C (beta, 970507) Output
AT3G26620.1     - - - M N P K R C A A C K Y L R R R C P K D C V F S P Y F P P N D P Q K F A C V H R I Y G A G N V S K M L Q Q L P D Q T
gm005177_Glyma0    M G G N S P - - C A S C K L L R R R C T K D C I F A P Y F P S D D P Q K F A I V H K V F G A S N V S K M L Q E L P V H Q
 
AT3G26620.1     R A E A V E S L C F E A K C R V D D P V Y G C V G I I H L L K T Q I Q K T Q N E L A K T Q A E I A V A Q T K - - - - - -
gm005177_Glyma0    R A D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S E L Q M Q L A V A Q A E I L C I Q M E H E P V M P
 
AT3G26620.1     - - - - - - - - - - - - L S Q T H I S D F M - - - - - - - - - - - - - -
gm005177_Glyma0    A A S G I D L D Y K S Y F L Q N D L S Q F L G F D T S S N V M Q Q F C P
 
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