fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027178 not found in 106aa AT3G26660.1 not_1st 0.629921259 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26660.1     MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE
pt027178_POPTR_ MISGRCAACKYLRRRCPSDCIFSPYFPSNNPRRFACVHRIHGASNVAKMLQQLPAHLRAE
                * . *************.**:******.*:*::*******:**.**:******* : ***

AT3G26660.1     AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF
pt027178_POPTR_ AANSLYYEAQCRTQDPVYGCVGILSLLHQQIHSVESQLAKTRAEIA--------------
                *.:** :**:**.:*********: **: **:..:.:****:****              

AT3G26660.1     M
pt027178_POPTR_ -
BoxShade v3.31 C (beta, 970507) Output
AT3G26660.1     M N P K R C A A C K Y L R R R C P K D C V F S P Y F P P N D P Q K F A C V H R I Y G A G N V S K M L Q Q L P D Q T R A E
pt027178_POPTR_    M I S G R C A A C K Y L R R R C P S D C I F S P Y F P S N N P R R F A C V H R I H G A S N V A K M L Q Q L P A H L R A E
 
AT3G26660.1     A V E S L C F E A K C R V D D P V Y G C V G I I H L L K T Q I Q K T Q N E L A K T Q A E I A V A Q T K L S Q T Q N S D F
pt027178_POPTR_    A A N S L Y Y E A Q C R T Q D P V Y G C V G I L S L L H Q Q I H S V E S Q L A K T R A E I A - - - - - - - - - - - - - -
 
AT3G26660.1     M
pt027178_POPTR_    -
 
0