fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018408 not found in 217aa AT2G30130.1 1st_not 0.539370078 II
Sb000281 not found in 180aa AT3G26660.1 not_1st 0.523622047 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G26660.1     --------------MNP-KRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGN
Sb018408_Sorbi1 -----------MGGGSP---CASCKLLRRRCTKDCIFAPFFPADDPHKFAIVHKVFGASN
Sb000281_Sorbi1 MSTSATNTEAAAASSSPGKRCAACKNQRRKCGHDCVLAPYFPASDPQRYACVQRVFGASN
                               .*   **:**  **:* :**:::*:**..**:::* *::::**.*

AT3G26660.1     VSKMLQQLPDQTRAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEI
Sb018408_Sorbi1 VSKMLQELPVQQRGDAVSSLVYEANARMRDPVYGCVGAISFLQNQVSQLQMQLAVAQAEI
Sb000281_Sorbi1 VARMLQNLPVHERARAADTMAMEARRRVQDPVYGCAGIVGRLQGEIRAAQCELARTQAQI
                *::***:** : *. *..::  **. *: ******.* :  *: ::   * :** :**:*

AT3G26660.1     AV------------------------------------------------AQTKLSQTQN
Sb018408_Sorbi1 LC----IQMQRRDDVDGGGGGPNVDDVVVPPPSSLVVGAGGGADHRHHNHMTMAAAMQQQ
Sb000281_Sorbi1 AVHAAAAAVRAR-----------------PAPAVDALAAG--------QHAPAAPLQQQD
                                                                          *:

AT3G26660.1     SDFM--------------------------------------------------------
Sb018408_Sorbi1 AMMATDDVDAFLMQNGAGATGAIVPPQLIGMGYGGAASAGAMGETTALKRESLWT-----
Sb000281_Sorbi1 DDAAFQGLDALLID------------------------------------DCRWDGLARL
                                                                            

AT3G26660.1     -
Sb018408_Sorbi1 -
Sb000281_Sorbi1 L
BoxShade v3.31 C (beta, 970507) Output
AT3G26660.1     - - - - - - - - - - - - - - M N P - K R C A A C K Y L R R R C P K D C V F S P Y F P P N D P Q K F A C V H R I Y G A G N
Sb018408_Sorbi1    - - - - - - - - - - - M G G G S P - - - C A S C K L L R R R C T K D C I F A P F F P A D D P H K F A I V H K V F G A S N
Sb000281_Sorbi1    M S T S A T N T E A A A A S S S P G K R C A A C K N Q R R K C G H D C V L A P Y F P A S D P Q R Y A C V Q R V F G A S N
 
AT3G26660.1     V S K M L Q Q L P D Q T R A E A V E S L C F E A K C R V D D P V Y G C V G I I H L L K T Q I Q K T Q N E L A K T Q A E I
Sb018408_Sorbi1    V S K M L Q E L P V Q Q R G D A V S S L V Y E A N A R M R D P V Y G C V G A I S F L Q N Q V S Q L Q M Q L A V A Q A E I
Sb000281_Sorbi1    V A R M L Q N L P V H E R A R A A D T M A M E A R R R V Q D P V Y G C A G I V G R L Q G E I R A A Q C E L A R T Q A Q I
 
AT3G26660.1     A V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A Q T K L S Q T Q N
Sb018408_Sorbi1    L C - - - - I Q M Q R R D D V D G G G G G P N V D D V V V P P P S S L V V G A G G G A D H R H H N H M T M A A A M Q Q Q
Sb000281_Sorbi1    A V H A A A A A V R A R - - - - - - - - - - - - - - - - - P A P A V D A L A A G - - - - - - - - Q H A P A A P L Q Q Q D
 
AT3G26660.1     S D F M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb018408_Sorbi1    A M M A T D D V D A F L M Q N G A G A T G A I V P P Q L I G M G Y G G A A S A G A M G E T T A L K R E S L W T - - - - -
Sb000281_Sorbi1    D D A A F Q G L D A L L I D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D C R W D G L A R L
 
AT3G26660.1     -
Sb018408_Sorbi1    -
Sb000281_Sorbi1    L
 
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