fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043930 not found in 375aa AT3G26790.1 1st_1st 0.527593818 Ia
Pt004410 not found in 286aa AT3G26790.1 1st_1st 0.567328918 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G26790.1     ------------------------------------------------------------
gm043930_Glyma1 MFPVSSPSIRHSLLGQSLTTTTTPWHQTLCHKLNPEKENQLLQSQKTKKTLCVCVCVSKK
pt004410_POPTR_ ------------------------------------------------------------
                                                                            

AT3G26790.1     -----MMV----DENV---ETKASTLVASV---------------DHGFGSGS-----GH
gm043930_Glyma1 KNPKLMMMDPRQREKLLH-KTEACAFVAGVVPELSLVTVPGNNNNTNNVN---------N
pt004410_POPTR_ -----MMM----HQGMVHEKPEACAWMAGG----EGVTEEGDNKQTPNIEGGSDLVIDGS
                     **:     : :   :.:*.: :*.                  ..           

AT3G26790.1     DHHGLSASVPLLGVNWKKRRMPRQRRSSSSFNLL-------------SFP-PPMPPISHV
gm043930_Glyma1 NNNNVSHS----QSH-RKKRMARQRRSTNPTLLMNPLINNNNNKSGSSLPSPSTASSSHV
pt004410_POPTR_ NRDHLAGSMVGLEIK-RKKRMPRQRR--------------------------SSSTINHL
                :.. :: *      : :*:**.****                          . .. .*:

AT3G26790.1     PTPLP----ARKIDPRKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIR
gm043930_Glyma1 PLSSSTLPPAREIDQRRLRFLFQKELKNSDVSSLRRMILPKKAAEAFLPALESKEGIVIS
pt004410_POPTR_ -LSFS----ANAIDPRRLRFLFQKELKNSDVSSLRRIILPKKAAEAHLPALESKEGIFIR
                  . .    *. ** *:*******************:*********.*****.**** * 

AT3G26790.1     MEDLDGFHVWTFKYRYWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQA
gm043930_Glyma1 MDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVNTHGLRFGDSILVYQDSENNNYVIQA
pt004410_POPTR_ MDDLDGLHAWSFKYRYWPNNNSRMYVLENTGDFVSAHGLELGDFIMVYQDNQSQNYVIQA
                *:*:**:*.*:****:******************.:***.:** *:****  .:******

AT3G26790.1     RKASEEEEVDVINLEEDDVYTNLTRIENTVVNDLLLQDFNHHNNNNNNNSNSNSNKCSYY
gm043930_Glyma1 KKASDQ-----------DEFMEETS---DTINDIFLNDY-------------EVNKPGCF
pt004410_POPTR_ KKASDQ-----------NVYTDIAR---NAVNDFVVHDY-------------EVSKLSSF
                :***::           : : : :     .:**:.::*:             : .* . :

AT3G26790.1     ---YPVIDDVTTNTESFVYDTTALTSNDTPLDFLGGHTTTTNNYYSKFGTFDGLGSVENI
gm043930_Glyma1 NVTYPAVNDTGM---SFIYETT-F-SNDSPLDFLGGSMTN----FSRIGPVETFGSVENL
pt004410_POPTR_ YVNYPVVDNTGL---SFIYDTTAF-SNDSPLDFLGGSMTN----FSRIGNLESFGSVENL
                   **.:::.     **:*:** : ***:*******  *.    :*::* .: :*****:

AT3G26790.1     SLDDFY
gm043930_Glyma1 SLDDFY
pt004410_POPTR_ FLDDFY
                 *****
BoxShade v3.31 C (beta, 970507) Output
AT3G26790.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm043930_Glyma1    M F P V S S P S I R H S L L G Q S L T T T T T P W H Q T L C H K L N P E K E N Q L L Q S Q K T K K T L C V C V C V S K K
pt004410_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G26790.1     - - - - - M M V - - - - D E N V - - - E T K A S T L V A S V - - - - - - - - - - - - - - - D H G F G S G S - - - - - G H
gm043930_Glyma1    K N P K L M M M D P R Q R E K L L H - K T E A C A F V A G V V P E L S L V T V P G N N N N T N N V N - - - - - - - - - N
pt004410_POPTR_    - - - - - M M M - - - - H Q G M V H E K P E A C A W M A G G - - - - E G V T E E G D N K Q T P N I E G G S D L V I D G S
 
AT3G26790.1     D H H G L S A S V P L L G V N W K K R R M P R Q R R S S S S F N L L - - - - - - - - - - - - - S F P - P P M P P I S H V
gm043930_Glyma1    N N N N V S H S - - - - Q S H - R K K R M A R Q R R S T N P T L L M N P L I N N N N N K S G S S L P S P S T A S S S H V
pt004410_POPTR_    N R D H L A G S M V G L E I K - R K K R M P R Q R R - - - - - - - - - - - - - - - - - - - - - - - - - - S S S T I N H L
 
AT3G26790.1     P T P L P - - - - A R K I D P R K L R F L F Q K E L K N S D V S S L R R M I L P K K A A E A H L P A L E C K E G I P I R
gm043930_Glyma1    P L S S S T L P P A R E I D Q R R L R F L F Q K E L K N S D V S S L R R M I L P K K A A E A F L P A L E S K E G I V I S
pt004410_POPTR_    - L S F S - - - - A N A I D P R R L R F L F Q K E L K N S D V S S L R R I I L P K K A A E A H L P A L E S K E G I F I R
 
AT3G26790.1     M E D L D G F H V W T F K Y R Y W P N N N S R M Y V L E N T G D F V N A H G L Q L G D F I M V Y Q D L Y S N N Y V I Q A
gm043930_Glyma1    M D D I D G L H V W S F K Y R F W P N N N S R M Y V L E N T G D F V N T H G L R F G D S I L V Y Q D S E N N N Y V I Q A
pt004410_POPTR_    M D D L D G L H A W S F K Y R Y W P N N N S R M Y V L E N T G D F V S A H G L E L G D F I M V Y Q D N Q S Q N Y V I Q A
 
AT3G26790.1     R K A S E E E E V D V I N L E E D D V Y T N L T R I E N T V V N D L L L Q D F N H H N N N N N N N S N S N S N K C S Y Y
gm043930_Glyma1    K K A S D Q - - - - - - - - - - - D E F M E E T S - - - D T I N D I F L N D Y - - - - - - - - - - - - - E V N K P G C F
pt004410_POPTR_    K K A S D Q - - - - - - - - - - - N V Y T D I A R - - - N A V N D F V V H D Y - - - - - - - - - - - - - E V S K L S S F
 
AT3G26790.1     - - - Y P V I D D V T T N T E S F V Y D T T A L T S N D T P L D F L G G H T T T T N N Y Y S K F G T F D G L G S V E N I
gm043930_Glyma1    N V T Y P A V N D T G M - - - S F I Y E T T - F - S N D S P L D F L G G S M T N - - - - F S R I G P V E T F G S V E N L
pt004410_POPTR_    Y V N Y P V V D N T G L - - - S F I Y D T T A F - S N D S P L D F L G G S M T N - - - - F S R I G N L E S F G S V E N L
 
AT3G26790.1     S L D D F Y
gm043930_Glyma1    S L D D F Y
pt004410_POPTR_    F L D D F Y
 
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