fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031271 not found in 297aa AT3G26790.1 not_1st 0.556291390 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26790.1     MMVDENVETKASTLVASVDHGFGS-----GSGHDHHGLSASVPLLGVNWK-KRRMPRQRR
pt031271_POPTR_ MAGGEGVTVEGDNKQSPNIEG-GSDLVIRGSTRDH--LVGS--MVGFEIKRKKRMPRQRR
                *  .*.* .:...  :.  .* **     ** :**  * .*  ::*.: * *:*******

AT3G26790.1     SSSSFN-LLSF--------------PPPMPPISHVPTPLPARKIDPRKLRFLFQKELKNS
pt031271_POPTR_ SSSTINHLLSFAANASCSATTHLHVPAFSLPLQD-PSSLPARVIDPRRLRFLFQKELQNS
                ***::* ****              *.   *:.. *:.**** ****:*********:**

AT3G26790.1     DVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKY-RYWPNNNSRMYVLE
pt031271_POPTR_ DVSSLRRMILPKKAAEVHLPFLESKEGIFISMDDLDGLHVWSFKYSRYWPNNNSRMYVLE
                ****************.*** **.**** * *:****:***:*** **************

AT3G26790.1     NTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKASEEEEVDVINLEEDDVYTNLTRIEN
pt031271_POPTR_ NTGDFVNAHGLQLGDFIMVYQDSQSQNYVIQAKKASDQ-----------NVYSDIAR---
                **********************  *:******:***::           :**::::*   

AT3G26790.1     TVVNDLLLQDFNHHNNNNNNNSNSNSNK-CSYY--YPVIDDVTTNTESFVYDTTALTSND
pt031271_POPTR_ NAVNDTVLHDY-------------EVNKFSSFYVNYPVVDNTGL---SFIYDTTTF-SNY
                ..*** :*:*:             : ** .*:*  ***:*:.     **:****:: ** 

AT3G26790.1     TPLDFLGGHTTTTNNYYSKFGTFDGLGSVENISLDDFY
pt031271_POPTR_ SPLDFLGGSMTN----FSRIGHLESFGSVENMSLDDFY
                :*******  *.    :*::* ::.:*****:******
BoxShade v3.31 C (beta, 970507) Output
AT3G26790.1     M M V D E N V E T K A S T L V A S V D H G F G S - - - - - G S G H D H H G L S A S V P L L G V N W K - K R R M P R Q R R
pt031271_POPTR_    M A G G E G V T V E G D N K Q S P N I E G - G S D L V I R G S T R D H - - L V G S - - M V G F E I K R K K R M P R Q R R
 
AT3G26790.1     S S S S F N - L L S F - - - - - - - - - - - - - - P P P M P P I S H V P T P L P A R K I D P R K L R F L F Q K E L K N S
pt031271_POPTR_    S S S T I N H L L S F A A N A S C S A T T H L H V P A F S L P L Q D - P S S L P A R V I D P R R L R F L F Q K E L Q N S
 
AT3G26790.1     D V S S L R R M I L P K K A A E A H L P A L E C K E G I P I R M E D L D G F H V W T F K Y - R Y W P N N N S R M Y V L E
pt031271_POPTR_    D V S S L R R M I L P K K A A E V H L P F L E S K E G I F I S M D D L D G L H V W S F K Y S R Y W P N N N S R M Y V L E
 
AT3G26790.1     N T G D F V N A H G L Q L G D F I M V Y Q D L Y S N N Y V I Q A R K A S E E E E V D V I N L E E D D V Y T N L T R I E N
pt031271_POPTR_    N T G D F V N A H G L Q L G D F I M V Y Q D S Q S Q N Y V I Q A K K A S D Q - - - - - - - - - - - N V Y S D I A R - - -
 
AT3G26790.1     T V V N D L L L Q D F N H H N N N N N N N S N S N S N K - C S Y Y - - Y P V I D D V T T N T E S F V Y D T T A L T S N D
pt031271_POPTR_    N A V N D T V L H D Y - - - - - - - - - - - - - E V N K F S S F Y V N Y P V V D N T G L - - - S F I Y D T T T F - S N Y
 
AT3G26790.1     T P L D F L G G H T T T T N N Y Y S K F G T F D G L G S V E N I S L D D F Y
pt031271_POPTR_    S P L D F L G G S M T N - - - - F S R I G H L E S F G S V E N M S L D D F Y
 
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