fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004410 not found in 286aa AT3G26790.1 1st_1st 0.567328918 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26790.1     MMVDENVETKASTLVASVDHGFG---------------------SGSGHDHHGLSASVPL
pt004410_POPTR_ MMMHQGMVHEKPEACAWMAGGEGVTEEGDNKQTPNIEGGSDLVIDGSNRDH--LAGSMVG
                **:.:.:  : .   * :  * *                     .**.:**  *:.*:  

AT3G26790.1     LGVNWKKRRMPRQRRSSSSFN-LLSFPPPMPPISHVPTPLPARKIDPRKLRFLFQKELKN
pt004410_POPTR_ LEIK-RKKRMPRQRRSSSTINHLLSF--------------SANAIDPRRLRFLFQKELKN
                * :: :*:**********::* ****              .*. ****:***********

AT3G26790.1     SDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYRYWPNNNSRMYVLE
pt004410_POPTR_ SDVSSLRRIILPKKAAEAHLPALESKEGIFIRMDDLDGLHAWSFKYRYWPNNNSRMYVLE
                ********:***************.**** ***:****:*.*:*****************

AT3G26790.1     NTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKASEEEEVDVINLEEDDVYTNLTRIEN
pt004410_POPTR_ NTGDFVSAHGLELGDFIMVYQDNQSQNYVIQAKKASDQ-----------NVYTDIAR---
                ******.****:**********  *:******:***::           :***:::*   

AT3G26790.1     TVVNDLLLQDFNHHNNNNNNNSNSNSNKCSYY--YPVIDDVTTNTESFVYDTTALTSNDT
pt004410_POPTR_ NAVNDFVVHDY------------EVSKLSSFYVNYPVVDNTGL---SFIYDTTAF-SNDS
                ..***::::*:            . *: .*:*  ***:*:.     **:*****: ***:

AT3G26790.1     PLDFLGGHTTTTNNYYSKFGTFDGLGSVENISLDDFY
pt004410_POPTR_ PLDFLGGSMTN----FSRIGNLESFGSVENLFLDDFY
                *******  *.    :*::*.::.:*****: *****
BoxShade v3.31 C (beta, 970507) Output
AT3G26790.1     M M V D E N V E T K A S T L V A S V D H G F G - - - - - - - - - - - - - - - - - - - - - S G S G H D H H G L S A S V P L
pt004410_POPTR_    M M M H Q G M V H E K P E A C A W M A G G E G V T E E G D N K Q T P N I E G G S D L V I D G S N R D H - - L A G S M V G
 
AT3G26790.1     L G V N W K K R R M P R Q R R S S S S F N - L L S F P P P M P P I S H V P T P L P A R K I D P R K L R F L F Q K E L K N
pt004410_POPTR_    L E I K - R K K R M P R Q R R S S S T I N H L L S F - - - - - - - - - - - - - - S A N A I D P R R L R F L F Q K E L K N
 
AT3G26790.1     S D V S S L R R M I L P K K A A E A H L P A L E C K E G I P I R M E D L D G F H V W T F K Y R Y W P N N N S R M Y V L E
pt004410_POPTR_    S D V S S L R R I I L P K K A A E A H L P A L E S K E G I F I R M D D L D G L H A W S F K Y R Y W P N N N S R M Y V L E
 
AT3G26790.1     N T G D F V N A H G L Q L G D F I M V Y Q D L Y S N N Y V I Q A R K A S E E E E V D V I N L E E D D V Y T N L T R I E N
pt004410_POPTR_    N T G D F V S A H G L E L G D F I M V Y Q D N Q S Q N Y V I Q A K K A S D Q - - - - - - - - - - - N V Y T D I A R - - -
 
AT3G26790.1     T V V N D L L L Q D F N H H N N N N N N N S N S N S N K C S Y Y - - Y P V I D D V T T N T E S F V Y D T T A L T S N D T
pt004410_POPTR_    N A V N D F V V H D Y - - - - - - - - - - - - E V S K L S S F Y V N Y P V V D N T G L - - - S F I Y D T T A F - S N D S
 
AT3G26790.1     P L D F L G G H T T T T N N Y Y S K F G T F D G L G S V E N I S L D D F Y
pt004410_POPTR_    P L D F L G G S M T N - - - - F S R I G N L E S F G S V E N L F L D D F Y
 
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