fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G26790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051671 not found in 174aa AT3G26790.1 not_1st 0.417218543 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G26790.1     MMVDENVETKASTLVASVDHGFGSGSGHDHHGLSASVPLLGVNWKKRRMPRQRRSSSSFN
gm051671_Glyma1 ------------------------------------------------------------
                                                                            

AT3G26790.1     LLSFPPPMPPISHVPTPLPARKIDPRKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPA
gm051671_Glyma1 ----------------------------------------------MILPKKAAEAFLPA
                                                              **********.***

AT3G26790.1     LECKEGIPIRMEDLDGFHVWTFKYRYWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQD
gm051671_Glyma1 LESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVNTHGLRFGDSIMVYQD
                **.**** * *:*:**:***:****:*******************:***::** ******

AT3G26790.1     LYSNNYVIQARKASEEEEVDVINLEEDDVYTNLTRIENTVVNDLLLQDFNHHNNNNNNNS
gm051671_Glyma1 SENNNYVIQAKKASDQDEF----MEE----------TSDTINDIFLNDYEVNKPGCFNVT
                  .*******:***:::*.    :**           . .:**::*:*:: :: .  * :

AT3G26790.1     NSNSNKCSYYYPVIDDVTTNTESFVYDTTALTSNDTPLDFLGGHTTTTNNYYSKFGTFDG
gm051671_Glyma1 N----------PAVNDTGM---SFIYETT--FSNDSPLDFLGGSMTN----FSRIGPVET
                *          *.::*.     **:*:**   ***:*******  *.    :*::*..: 

AT3G26790.1     LGSVENISLDDFY
gm051671_Glyma1 FGSVENLSLDDFY
                :*****:******
BoxShade v3.31 C (beta, 970507) Output
AT3G26790.1     M M V D E N V E T K A S T L V A S V D H G F G S G S G H D H H G L S A S V P L L G V N W K K R R M P R Q R R S S S S F N
gm051671_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G26790.1     L L S F P P P M P P I S H V P T P L P A R K I D P R K L R F L F Q K E L K N S D V S S L R R M I L P K K A A E A H L P A
gm051671_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M I L P K K A A E A F L P A
 
AT3G26790.1     L E C K E G I P I R M E D L D G F H V W T F K Y R Y W P N N N S R M Y V L E N T G D F V N A H G L Q L G D F I M V Y Q D
gm051671_Glyma1    L E S K E G I V I S M D D I D G L H V W S F K Y R F W P N N N S R M Y V L E N T G D F V N T H G L R F G D S I M V Y Q D
 
AT3G26790.1     L Y S N N Y V I Q A R K A S E E E E V D V I N L E E D D V Y T N L T R I E N T V V N D L L L Q D F N H H N N N N N N N S
gm051671_Glyma1    S E N N N Y V I Q A K K A S D Q D E F - - - - M E E - - - - - - - - - - T S D T I N D I F L N D Y E V N K P G C F N V T
 
AT3G26790.1     N S N S N K C S Y Y Y P V I D D V T T N T E S F V Y D T T A L T S N D T P L D F L G G H T T T T N N Y Y S K F G T F D G
gm051671_Glyma1    N - - - - - - - - - - P A V N D T G M - - - S F I Y E T T - - F S N D S P L D F L G G S M T N - - - - F S R I G P V E T
 
AT3G26790.1     L G S V E N I S L D D F Y
gm051671_Glyma1    F G S V E N L S L D D F Y
 
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