fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043967 AQHMPGLELGLSQDGH in 280/345 AT3G27010.1 not_1st 0.438735177 II
Pt003590 SQQLPGLELGLSQDGH in 272/321 AT3G27010.1 not_1st 0.490118577 II
Pt010021 NQQLPGLELGLSQDGH in 246/302 AT3G27010.1 not_1st 0.422924901 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G27010.1     MDPKNLNRHQ-------VPNFLN--------------PPPPPRNQGLVDDDAASAVVSDE
gm043967_Glyma1 MDPKGSK-QQPQQSQEVVPNFLSL----------------PQQQQGNTNNN------NMG
pt003590_POPTR_ MDPKGSNSKNPHE----LPTFFTLTHTHTSPSPSPHTPPQPHHQQPQHLHNQNQLQPNMG
pt010021_POPTR_ MEPKSPNQYQPQ-----MPSFLN-----------------PPQEASMSENN-----INSN
                *:**. :  :       :*.*:.                 * ::     .:      .  

AT3G27010.1     NRKPTTEIKDFQIVVSASD-KEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALC
gm043967_Glyma1 ENKP-AEVKDFQIVV--AENKEESKKQ--QQQLAPKRSSNKDRHTKVEGRGRRIRMPALC
pt003590_POPTR_ ENKA-AEIKDFQIVV--AD-KEEQKK-----QLAPKRSSNKDRHTKVEGRGRRIRMPALC
pt010021_POPTR_ NNKP-ADIEDFQNMM--AD-KDDSKK-----KLAPKRSSNKDRHKKVEGRGRRIRIPALC
                :.*. ::::*** ::  :: *: .**     :*.**********.**********:****

AT3G27010.1     AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSL
gm043967_Glyma1 AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALA-AAGNSLSPQAASL
pt003590_POPTR_ AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALA-AAGGAISQQGASL
pt010021_POPTR_ AARIFQLTRELEHKSDGETIQWLLQQAEPSIIAATGTGTIPASALA-AAGASVSEQGGSV
                *********** ************************:********* :*. :   *..*:

AT3G27010.1     TAGLM---ISHDLDGGSS-SSGRPLNWGIGGGEGVSRSSL------PTGLWPN-VAGFG-
gm043967_Glyma1 SSSLHQHQQKIDELGGSG-GSSSRASWQMVGGN-LGRPHLGVGVATAAGLWPPHVSGFGF
pt003590_POPTR_ SAGLH---QKIDDIGES---SSRRTSWAMLGGN-LGRPHQ----VTSAGLWPP-VGGYGF
pt010021_POPTR_ STGLH---AKMEGLGPGVTGSRDRNDWTLSNTK-LGISNV------ATGVWPS-VGGIGL
                ::.*     . :  * .   *    .* : . : :. .        .:*:**  *.* * 

AT3G27010.1     ---------------SGVPTTGLMSE---GAGY--RIGFPGFDFP-----GVGHMSFASI
gm043967_Glyma1 QTPPTTTTPTTTTSSSGPSNATLATE---SSNYLQKIAFPGFDLPTSATNMMGHMSFTSI
pt003590_POPTR_ QSSSNTT---------GPSTTNIVSEGGGGSSYLQKNGFSGFDMP---GNNIGPMSLTSI
pt010021_POPTR_ GFVPNS----------GQSTSNFGNE---NSSTLPKYGFQGVEFP---NINMGLMSFYSM
                                * ..: : .*   .:.   : .* *.::*      :* **: *:

AT3G27010.1     L----GGNHNQMPGLELGLSQEGNVGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNH-
gm043967_Glyma1 LGGGGGGGAQHMPGLELGLSQDGHIGVLNQQALNQIYQQMNQA-----GRVHHHQHQHHH
pt003590_POPTR_ L----GVGSQQLPGLELGLSQDGHIGVLSPQALSQIYQQMGQA------RV---------
pt010021_POPTR_ F----SGTNQQLPGLELGLSQDGHSAMLNPQALSPFYHQMVQG-----RGVLDSLNQ---
                :    .   :::*********:*: .:*. *::. :*:** *.       *         

AT3G27010.1     -----EEHQQESGEKDDSQGSGR-
gm043967_Glyma1 QHHQQQQHHQQTPAKDDSQGSGGQ
pt003590_POPTR_ -----QQHQQQNPSKDDSQGSGQ-
pt010021_POPTR_ -----EKQQEQPPDKDDSQGSRQ-
                     ::::::   *******
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     M D P K N L N R H Q - - - - - - - V P N F L N - - - - - - - - - - - - - - P P P P P R N Q G L V D D D A A S A V V S D E
gm043967_Glyma1    M D P K G S K - Q Q P Q Q S Q E V V P N F L S L - - - - - - - - - - - - - - - - P Q Q Q Q G N T N N N - - - - - - N M G
pt003590_POPTR_    M D P K G S N S K N P H E - - - - L P T F F T L T H T H T S P S P S P H T P P Q P H H Q Q P Q H L H N Q N Q L Q P N M G
pt010021_POPTR_    M E P K S P N Q Y Q P Q - - - - - M P S F L N - - - - - - - - - - - - - - - - - P P Q E A S M S E N N - - - - - I N S N
 
AT3G27010.1     N R K P T T E I K D F Q I V V S A S D - K E P N K K S Q N Q N Q L G P K R S S N K D R H T K V E G R G R R I R M P A L C
gm043967_Glyma1    E N K P - A E V K D F Q I V V - - A E N K E E S K K Q - - Q Q Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C
pt003590_POPTR_    E N K A - A E I K D F Q I V V - - A D - K E E Q K K - - - - - Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C
pt010021_POPTR_    N N K P - A D I E D F Q N M M - - A D - K D D S K K - - - - - K L A P K R S S N K D R H K K V E G R G R R I R I P A L C
 
AT3G27010.1     A A R I F Q L T R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G S G T I P A S A L A S S A A T S N H H Q G G S L
gm043967_Glyma1    A A R I F Q L T R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A - A A G N S L S P Q A A S L
pt003590_POPTR_    A A R I F Q L T R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A - A A G G A I S Q Q G A S L
pt010021_POPTR_    A A R I F Q L T R E L E H K S D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A - A A G A S V S E Q G G S V
 
AT3G27010.1     T A G L M - - - I S H D L D G G S S - S S G R P L N W G I G G G E G V S R S S L - - - - - - P T G L W P N - V A G F G -
gm043967_Glyma1    S S S L H Q H Q Q K I D E L G G S G - G S S S R A S W Q M V G G N - L G R P H L G V G V A T A A G L W P P H V S G F G F
pt003590_POPTR_    S A G L H - - - Q K I D D I G E S - - - S S R R T S W A M L G G N - L G R P H Q - - - - V T S A G L W P P - V G G Y G F
pt010021_POPTR_    S T G L H - - - A K M E G L G P G V T G S R D R N D W T L S N T K - L G I S N V - - - - - - A T G V W P S - V G G I G L
 
AT3G27010.1     - - - - - - - - - - - - - - - S G V P T T G L M S E - - - G A G Y - - R I G F P G F D F P - - - - - G V G H M S F A S I
gm043967_Glyma1    Q T P P T T T T P T T T T S S S G P S N A T L A T E - - - S S N Y L Q K I A F P G F D L P T S A T N M M G H M S F T S I
pt003590_POPTR_    Q S S S N T T - - - - - - - - - G P S T T N I V S E G G G G S S Y L Q K N G F S G F D M P - - - G N N I G P M S L T S I
pt010021_POPTR_    G F V P N S - - - - - - - - - - G Q S T S N F G N E - - - N S S T L P K Y G F Q G V E F P - - - N I N M G L M S F Y S M
 
AT3G27010.1     L - - - - G G N H N Q M P G L E L G L S Q E G N V G V L N P Q S F T Q I Y Q Q M G Q A Q A Q A Q G R V L H H M H H N H -
gm043967_Glyma1    L G G G G G G G A Q H M P G L E L G L S Q D G H I G V L N Q Q A L N Q I Y Q Q M N Q A - - - - - G R V H H H Q H Q H H H
pt003590_POPTR_    L - - - - G V G S Q Q L P G L E L G L S Q D G H I G V L S P Q A L S Q I Y Q Q M G Q A - - - - - - R V - - - - - - - - -
pt010021_POPTR_    F - - - - S G T N Q Q L P G L E L G L S Q D G H S A M L N P Q A L S P F Y H Q M V Q G - - - - - R G V L D S L N Q - - -
 
AT3G27010.1     - - - - - E E H Q Q E S G E K D D S Q G S G R -
gm043967_Glyma1    Q H H Q Q Q Q H H Q Q T P A K D D S Q G S G G Q
pt003590_POPTR_    - - - - - Q Q H Q Q Q N P S K D D S Q G S G Q -
pt010021_POPTR_    - - - - - E K Q Q E Q P P D K D D S Q G S R Q -
 
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