fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005399 AAAMPGLELGLSQDGH in 253/317 AT3G27010.1 1st_1st 0.335968379 Ib
Sb026383 AAAMPGLELGLSQDGH in 258/464 AT3G27010.1 1st_1st 0.349802371 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G27010.1     ----MDPKNLNRHQVPNFLNPPPP-PRNQGLVDDDAASAVV-SDENRKPTTEIKD-----
Sb026383_Sorbi1 TKRSPPPR-----------RPPPPRPRSS-----SSSSWILRTTSSRRSSTTCKSKSTSR
Os005399_Os01t0 ----MDPK-----------FPPPP-PLNK-----------------TEPTTTTTNQQHHH
                      *:            **** * ..                  ..:*  ..     

AT3G27010.1     --------FQIVVSASDKEPN-------------KKSQNQNQ----------------LG
Sb026383_Sorbi1 RRSSSSSRTEARSSSCRWWRSPGSGGSRRSRPSGAPTRTATPRSTAGAAGSGCPR---CA
Os005399_Os01t0 DEQQQQHRLQIQVHPQQQEQQDGGGG------GGKDQQQQQQMQVVVAAAAGERRMQGLG
                         :    .     .                :                     .

AT3G27010.1     PKRSSNKDRHTKVEGRGRRIRMPAL-----CAARIFQLT----------RELGHKSDGET
Sb026383_Sorbi1 PRGSSSS--------RGNSATSPTARPCSGCCSRPSRPSSPPPAPAPYRRPRSHPSRPRS
Os005399_Os01t0 PKRSSNKDRHTKVDGRGRRIRMPAL-----CAARIFQLT----------RELGHKSDGET
                *: **..        **.    *:      *.:*  : :          *  .* *  .:

AT3G27010.1     IQWLLQQAEP------SIIAATGSGTIPASALAS--------------------------
Sb026383_Sorbi1 -----RRPPPGSPGRTTTTTRTTCGRRPPRPRVSPRPPSSIPPPRARETPLVSADSCSGW
Os005399_Os01t0 VQWLLQQAEP------AIVAATGTGTIPASALASVAP--SLPSP----------------
                     ::. *      :  : *  *  *. . .*                          

AT3G27010.1     -SAATSNHHQGGSL--------TAGLM-ISHDL---DGGSSSSGRPLNWGIGGGEGVSRS
Sb026383_Sorbi1 GSPRVSSCREAAPLEAPSALAATSALRPCSLDTPRPCRGSSSASR--RTATSACSQRSRS
Os005399_Os01t0 NSALSRSHHHHHHMWAAAPPTASAGF-----------AGAGFSGA--DSGVIGGI-MQRM
                 *.   . :.   :        ::.:            *:. :.     .  .    .* 

AT3G27010.1     SLPTGLW---------------------PNVAGFGSGVPTTGLMSEGAGYRIG-------
Sb026383_Sorbi1 ASSTTKWVLLAAAARCSTRTATSITIISSRRTGRTTARTASPMTSLGSSVVVQLQPCVFW
Os005399_Os01t0 GIPAGI-----------------------ELQGGGAG----GLGGGGGG-----------
                . .:                         .  *  :.     : . *..           

AT3G27010.1     -FPGFDFPGVGHMSFASILGGN---HNQMPGLELGL------SQEGNVGVLNPQSFTQIY
Sb026383_Sorbi1 VFPQVKE-GKERKVYA---CSH--------GMLLLLLDCCSSSCDGFLSSFFSRVVSKLN
Os005399_Os01t0 --------GGGHIGFAPMFASHAAAAAAMPGLELGL------SQDGHIGVLAAQSLSQFY
                        *  :  :*    .:        *: * *      * :* :. : .: .::: 

AT3G27010.1     QQMGQA-QAQAQGRVLHHMHHNHEEHQQESGE--KDDSQG---SGR
Sb026383_Sorbi1 GGLSCSEDLPPR----DHPQFFPQSHGVDDRHSLLSDFQV-YNS--
Os005399_Os01t0 HQVGAAGQLQHQ-----HQHHHQQQQQQQDGEDNRDDGESDEESGQ
                  :. : :   :     * :.  :.:  :. .   .* :    *
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     - - - - M D P K N L N R H Q V P N F L N P P P P - P R N Q G L V D D D A A S A V V - S D E N R K P T T E I K D - - - - -
Sb026383_Sorbi1    T K R S P P P R - - - - - - - - - - - R P P P P R P R S S - - - - - S S S S W I L R T T S S R R S S T T C K S K S T S R
Os005399_Os01t0    - - - - M D P K - - - - - - - - - - - F P P P P - P L N K - - - - - - - - - - - - - - - - - T E P T T T T T N Q Q H H H
 
AT3G27010.1     - - - - - - - - F Q I V V S A S D K E P N - - - - - - - - - - - - - K K S Q N Q N Q - - - - - - - - - - - - - - - - L G
Sb026383_Sorbi1    R R S S S S S R T E A R S S S C R W W R S P G S G G S R R S R P S G A P T R T A T P R S T A G A A G S G C P R - - - C A
Os005399_Os01t0    D E Q Q Q Q H R L Q I Q V H P Q Q Q E Q Q D G G G G - - - - - - G G K D Q Q Q Q Q Q M Q V V V A A A A G E R R M Q G L G
 
AT3G27010.1     P K R S S N K D R H T K V E G R G R R I R M P A L - - - - - C A A R I F Q L T - - - - - - - - - - R E L G H K S D G E T
Sb026383_Sorbi1    P R G S S S S - - - - - - - - R G N S A T S P T A R P C S G C C S R P S R P S S P P P A P A P Y R R P R S H P S R P R S
Os005399_Os01t0    P K R S S N K D R H T K V D G R G R R I R M P A L - - - - - C A A R I F Q L T - - - - - - - - - - R E L G H K S D G E T
 
AT3G27010.1     I Q W L L Q Q A E P - - - - - - S I I A A T G S G T I P A S A L A S - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026383_Sorbi1    - - - - - R R P P P G S P G R T T T T T R T T C G R R P P R P R V S P R P P S S I P P P R A R E T P L V S A D S C S G W
Os005399_Os01t0    V Q W L L Q Q A E P - - - - - - A I V A A T G T G T I P A S A L A S V A P - - S L P S P - - - - - - - - - - - - - - - -
 
AT3G27010.1     - S A A T S N H H Q G G S L - - - - - - - - T A G L M - I S H D L - - - D G G S S S S G R P L N W G I G G G E G V S R S
Sb026383_Sorbi1    G S P R V S S C R E A A P L E A P S A L A A T S A L R P C S L D T P R P C R G S S S A S R - - R T A T S A C S Q R S R S
Os005399_Os01t0    N S A L S R S H H H H H H M W A A A P P T A S A G F - - - - - - - - - - - A G A G F S G A - - D S G V I G G I - M Q R M
 
AT3G27010.1     S L P T G L W - - - - - - - - - - - - - - - - - - - - - P N V A G F G S G V P T T G L M S E G A G Y R I G - - - - - - -
Sb026383_Sorbi1    A S S T T K W V L L A A A A R C S T R T A T S I T I I S S R R T G R T T A R T A S P M T S L G S S V V V Q L Q P C V F W
Os005399_Os01t0    G I P A G I - - - - - - - - - - - - - - - - - - - - - - - E L Q G G G A G - - - - G L G G G G G G - - - - - - - - - - -
 
AT3G27010.1     - F P G F D F P G V G H M S F A S I L G G N - - - H N Q M P G L E L G L - - - - - - S Q E G N V G V L N P Q S F T Q I Y
Sb026383_Sorbi1    V F P Q V K E - G K E R K V Y A - - - C S H - - - - - - - - G M L L L L L D C C S S S C D G F L S S F F S R V V S K L N
Os005399_Os01t0    - - - - - - - - G G G H I G F A P M F A S H A A A A A A M P G L E L G L - - - - - - S Q D G H I G V L A A Q S L S Q F Y
 
AT3G27010.1     Q Q M G Q A - Q A Q A Q G R V L H H M H H N H E E H Q Q E S G E - - K D D S Q G - - - S G R
Sb026383_Sorbi1    G G L S C S E D L P P R - - - - D H P Q F F P Q S H G V D D R H S L L S D F Q V - Y N S - -
Os005399_Os01t0    H Q V G A A G Q L Q H Q - - - - - H Q H H H Q Q Q Q Q Q Q D G E D N R D D G E S D E E S G Q
 
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