fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031931 TQQLPGLELGLSQDGH in 269/320 AT3G27010.1 1st_1st 0.492094861 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G27010.1     MDPKNLNR---HQVPNFL--------NPPPPP---RNQGLVDDDAASAVVSDENRKPTTE
pt031931_POPTR_ MDPKGSNSKNPHELPTFLTHTHPSPPHPPPQPHLQQPQQLHSQNQQQPNMGDN--KP-AE
                ****. *    *::*.**        :*** *   : * * .::  .. :.*:  ** :*

AT3G27010.1     IKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLT
pt031931_POPTR_ IKDFQIVV--ADKEEQKK-----QLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLT
                ********  :*** :**     **.**********************************

AT3G27010.1     RELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSLTAGLMISH
pt031931_POPTR_ RELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAIS-QQGASLSAGLHQKI
                ****************************:*********::..: . :**.**:***  . 

AT3G27010.1     DLDGGSSSSGRPLNWG-IGGGEGVSRSSLPTGLWPNVAGFG-------SGVPTTGLMSE-
pt031931_POPTR_ DDLGGSSSS--RASWAMLGGNLGRPHHVTTAGLWPPVGGYGFQSSSNSTGPSTTNIGTEA
                *  ******    .*. :**. * .:   .:**** *.*:*       :* .**.: :* 

AT3G27010.1     ----GAGY--RIGFPGFDFPG--VGHMSFASILGGNHNQMPGLELGLSQEGNVGVLNPQS
pt031931_POPTR_ AAAGGSSYLQKLGFPGFDLPGNNMGPMSFTSILGGGTQQLPGLELGLSQDGHIGVLSPQA
                    *:.*  ::******:**  :* ***:*****. :*:*********:*::***.**:

AT3G27010.1     FTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGSGR
pt031931_POPTR_ LNQIYQQMGHARVHQQ------------QHQQQNPSKDDSQGSGQ
                :.*******:*:.: *            :***:. .********:
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     M D P K N L N R - - - H Q V P N F L - - - - - - - - N P P P P P - - - R N Q G L V D D D A A S A V V S D E N R K P T T E
pt031931_POPTR_    M D P K G S N S K N P H E L P T F L T H T H P S P P H P P P Q P H L Q Q P Q Q L H S Q N Q Q Q P N M G D N - - K P - A E
 
AT3G27010.1     I K D F Q I V V S A S D K E P N K K S Q N Q N Q L G P K R S S N K D R H T K V E G R G R R I R M P A L C A A R I F Q L T
pt031931_POPTR_    I K D F Q I V V - - A D K E E Q K K - - - - - Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C A A R I F Q L T
 
AT3G27010.1     R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G S G T I P A S A L A S S A A T S N H H Q G G S L T A G L M I S H
pt031931_POPTR_    R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A A A G G A I S - Q Q G A S L S A G L H Q K I
 
AT3G27010.1     D L D G G S S S S G R P L N W G - I G G G E G V S R S S L P T G L W P N V A G F G - - - - - - - S G V P T T G L M S E -
pt031931_POPTR_    D D L G G S S S S - - R A S W A M L G G N L G R P H H V T T A G L W P P V G G Y G F Q S S S N S T G P S T T N I G T E A
 
AT3G27010.1     - - - - G A G Y - - R I G F P G F D F P G - - V G H M S F A S I L G G N H N Q M P G L E L G L S Q E G N V G V L N P Q S
pt031931_POPTR_    A A A G G S S Y L Q K L G F P G F D L P G N N M G P M S F T S I L G G G T Q Q L P G L E L G L S Q D G H I G V L S P Q A
 
AT3G27010.1     F T Q I Y Q Q M G Q A Q A Q A Q G R V L H H M H H N H E E H Q Q E S G E K D D S Q G S G R
pt031931_POPTR_    L N Q I Y Q Q M G H A R V H Q Q - - - - - - - - - - - - Q H Q Q Q N P S K D D S Q G S G Q
 
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