fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031931 TQQLPGLELGLSQDGH in 269/320 AT3G27010.1 1st_1st 0.492094861 Ia
Pt003590 SQQLPGLELGLSQDGH in 272/321 AT3G27010.1 not_1st 0.490118577 II
Pt010021 NQQLPGLELGLSQDGH in 246/302 AT3G27010.1 not_1st 0.422924901 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G27010.1     MDPKNLNR---HQVPNF--LN---------PPPPPRNQGLVDDDAASAVVSDEN------
pt031931_POPTR_ MDPKGSNSKNPHELPTF--LTHTHPSP---PHPPPQPHLQQPQQ-----LHSQNQQQPNM
pt010021_POPTR_ MEPKSPNQYQP-QMPSF--LN------------PPQEASMSENN-----INSNN------
pt003590_POPTR_ MDPKGSNSKNPHELPTFFTLTHTHTSPSPSPHTPPQPHHQQPQH-----LHNQNQLQPNM
                *:**. *     ::*.*  *.            **:      :.     : .:*      

AT3G27010.1     --RKPTTEIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALC
pt031931_POPTR_ GDNKP-AEIKDFQIVV--ADKEEQKK-----QLAPKRSSNKDRHTKVEGRGRRIRMPALC
pt010021_POPTR_ --NKP-ADIEDFQNMM--ADKDDSKK-----KLAPKRSSNKDRHKKVEGRGRRIRIPALC
pt003590_POPTR_ GENKA-AEIKDFQIVV--ADKEEQKK-----QLAPKRSSNKDRHTKVEGRGRRIRMPALC
                  .*. ::*:*** ::  :**: .**     :*.**********.**********:****

AT3G27010.1     AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSL
pt031931_POPTR_ AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAIS-QQGASL
pt010021_POPTR_ AARIFQLTRELEHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVS-EQGGSV
pt003590_POPTR_ AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAIS-QQGASL
                *********** ************************:*********::..: . .**.*:

AT3G27010.1     TAGLMISHDLDG-GSSSSGRPLNWGIGGGE-GVSRSSLPTGLWPNVAGFGS-------GV
pt031931_POPTR_ SAGLHQKIDDLG---GSSSSRASWAMLGGNLGRPHHVTTAGLWPPVGGYGFQSSSNSTGP
pt010021_POPTR_ STGLHAKMEGLGPGVTGSRDRNDWTLSNTKLGISNVAT--GVWPSVGGIGLGFVPNS-GQ
pt003590_POPTR_ SAGLHQKIDDIG---ESSSRRTSWAMLGGNLGRPHQVTSAGLWPPVGGYGFQSSSNTTGP
                ::**  . :  *    .*    .* : . : * ..     *:** *.* *        * 

AT3G27010.1     PTTGLMSE-----GAGY--RIGFPGFDFPG--VGHMSFASILGGNHNQMPGLELGLSQEG
pt031931_POPTR_ STTNIGTEAAAAGGSSYLQKLGFPGFDLPGNNMGPMSFTSILGGGTQQLPGLELGLSQDG
pt010021_POPTR_ STSNFGNE-----NSSTLPKYGFQGVEFPNINMGLMSFYSMFSGTNQQLPGLELGLSQDG
pt003590_POPTR_ STTNIVSE--GGGGSSYLQKNGFSGFDMPGNNIGPMSLTSILGVGSQQLPGLELGLSQDG
                .*:.: .*     .:.   : ** *.::*.  :* **: *::.   :*:*********:*

AT3G27010.1     NVGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGSGR
pt031931_POPTR_ HIGVLSPQALNQIYQQMGHAR----------VH--QQQHQQQNPSKDDSQGSGQ
pt010021_POPTR_ HSAMLNPQALSPFYHQMVQGRG-----VLDSLN--QEKQQEQPPDKDDSQGSRQ
pt003590_POPTR_ HIGVLSPQALSQIYQQMGQAR----------V----QQHQQQNPSKDDSQGSGQ
                : .:*.**::. :*:** :.:          :    :::*::  .******* :
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     M D P K N L N R - - - H Q V P N F - - L N - - - - - - - - - P P P P P R N Q G L V D D D A A S A V V S D E N - - - - - -
pt031931_POPTR_    M D P K G S N S K N P H E L P T F - - L T H T H P S P - - - P H P P P Q P H L Q Q P Q Q - - - - - L H S Q N Q Q Q P N M
pt010021_POPTR_    M E P K S P N Q Y Q P - Q M P S F - - L N - - - - - - - - - - - - P P Q E A S M S E N N - - - - - I N S N N - - - - - -
pt003590_POPTR_    M D P K G S N S K N P H E L P T F F T L T H T H T S P S P S P H T P P Q P H H Q Q P Q H - - - - - L H N Q N Q L Q P N M
 
AT3G27010.1     - - R K P T T E I K D F Q I V V S A S D K E P N K K S Q N Q N Q L G P K R S S N K D R H T K V E G R G R R I R M P A L C
pt031931_POPTR_    G D N K P - A E I K D F Q I V V - - A D K E E Q K K - - - - - Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C
pt010021_POPTR_    - - N K P - A D I E D F Q N M M - - A D K D D S K K - - - - - K L A P K R S S N K D R H K K V E G R G R R I R I P A L C
pt003590_POPTR_    G E N K A - A E I K D F Q I V V - - A D K E E Q K K - - - - - Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C
 
AT3G27010.1     A A R I F Q L T R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G S G T I P A S A L A S S A A T S N H H Q G G S L
pt031931_POPTR_    A A R I F Q L T R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A A A G G A I S - Q Q G A S L
pt010021_POPTR_    A A R I F Q L T R E L E H K S D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A A A G A S V S - E Q G G S V
pt003590_POPTR_    A A R I F Q L T R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A A A G G A I S - Q Q G A S L
 
AT3G27010.1     T A G L M I S H D L D G - G S S S S G R P L N W G I G G G E - G V S R S S L P T G L W P N V A G F G S - - - - - - - G V
pt031931_POPTR_    S A G L H Q K I D D L G - - - G S S S S R A S W A M L G G N L G R P H H V T T A G L W P P V G G Y G F Q S S S N S T G P
pt010021_POPTR_    S T G L H A K M E G L G P G V T G S R D R N D W T L S N T K L G I S N V A T - - G V W P S V G G I G L G F V P N S - G Q
pt003590_POPTR_    S A G L H Q K I D D I G - - - E S S S R R T S W A M L G G N L G R P H Q V T S A G L W P P V G G Y G F Q S S S N T T G P
 
AT3G27010.1     P T T G L M S E - - - - - G A G Y - - R I G F P G F D F P G - - V G H M S F A S I L G G N H N Q M P G L E L G L S Q E G
pt031931_POPTR_    S T T N I G T E A A A A G G S S Y L Q K L G F P G F D L P G N N M G P M S F T S I L G G G T Q Q L P G L E L G L S Q D G
pt010021_POPTR_    S T S N F G N E - - - - - N S S T L P K Y G F Q G V E F P N I N M G L M S F Y S M F S G T N Q Q L P G L E L G L S Q D G
pt003590_POPTR_    S T T N I V S E - - G G G G S S Y L Q K N G F S G F D M P G N N I G P M S L T S I L G V G S Q Q L P G L E L G L S Q D G
 
AT3G27010.1     N V G V L N P Q S F T Q I Y Q Q M G Q A Q A Q A Q G R V L H H M H H N H E E H Q Q E S G E K D D S Q G S G R
pt031931_POPTR_    H I G V L S P Q A L N Q I Y Q Q M G H A R - - - - - - - - - - V H - - Q Q Q H Q Q Q N P S K D D S Q G S G Q
pt010021_POPTR_    H S A M L N P Q A L S P F Y H Q M V Q G R G - - - - - V L D S L N - - Q E K Q Q E Q P P D K D D S Q G S R Q
pt003590_POPTR_    H I G V L S P Q A L S Q I Y Q Q M G Q A R - - - - - - - - - - V - - - - Q Q H Q Q Q N P S K D D S Q G S G Q
 
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