fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005399 AAAMPGLELGLSQDGH in 253/317 AT3G27010.1 1st_1st 0.335968379 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G27010.1     MDPKNLNRHQVPNFLNPPPPPRNQGLVDDDAASAVVSDENRKPTTEIKD-----------
Os005399_Os01t0 MDPK-----------FPPPPPLNK----------------TEPTTTTTNQQHHHDEQQQQ
                ****            ***** *:                 :***  .:           

AT3G27010.1     --FQIVVSASDKEPN-------KKSQNQNQ----------------LGPKRSSNKDRHTK
Os005399_Os01t0 HRLQIQVHPQQQEQQDGGGGGGKDQQQQQQMQVVVAAAAGERRMQGLGPKRSSNKDRHTK
                  :** * ..::* :       *..*:*:*                **************

AT3G27010.1     VEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALA
Os005399_Os01t0 VDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALA
                *:*******************************:*********:*:****:*********

AT3G27010.1     S---------SAATSNHHQGGSL--------TAGLMISHDLDGGSSSSGRPLNWGIGGGE
Os005399_Os01t0 SVAPSLPSPNSALSRSHHHHHHMWAAAPPTASAGF-------AGAGFSGA--DSGVIGGI
                *         ** : .**:   :        :**:       .*:. **   : *: ** 

AT3G27010.1     GVSRSSLPTGLWPNVAGFGSGVPTTGLMSEGAGYRIGFPGFDFPGVGHMSFASILGGN--
Os005399_Os01t0 -MQRMGIPAGI--ELQGGGAG----GLGGGGGG-----------GGGHIGFAPMFASHAA
                 :.* .:*:*:  :: * *:*    ** . *.*           * **:.**.::..:  

AT3G27010.1     -HNQMPGLELGLSQEGNVGVLNPQSFTQIYQQMGQA-QAQAQGRVLHHMHHNHEEHQQES
Os005399_Os01t0 AAAAMPGLELGLSQDGHIGVLAAQSLSQFYHQVGAAGQLQHQ-----HQHHHQQQQQQQD
                    **********:*::*** .**::*:*:*:* * * * *     * **:::::**:.

AT3G27010.1     GE--KDDSQG---SGR
Os005399_Os01t0 GEDNRDDGESDEESGQ
                **  :**.:.   **:
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     M D P K N L N R H Q V P N F L N P P P P P R N Q G L V D D D A A S A V V S D E N R K P T T E I K D - - - - - - - - - - -
Os005399_Os01t0    M D P K - - - - - - - - - - - F P P P P P L N K - - - - - - - - - - - - - - - - T E P T T T T T N Q Q H H H D E Q Q Q Q
 
AT3G27010.1     - - F Q I V V S A S D K E P N - - - - - - - K K S Q N Q N Q - - - - - - - - - - - - - - - - L G P K R S S N K D R H T K
Os005399_Os01t0    H R L Q I Q V H P Q Q Q E Q Q D G G G G G G K D Q Q Q Q Q Q M Q V V V A A A A G E R R M Q G L G P K R S S N K D R H T K
 
AT3G27010.1     V E G R G R R I R M P A L C A A R I F Q L T R E L G H K S D G E T I Q W L L Q Q A E P S I I A A T G S G T I P A S A L A
Os005399_Os01t0    V D G R G R R I R M P A L C A A R I F Q L T R E L G H K S D G E T V Q W L L Q Q A E P A I V A A T G T G T I P A S A L A
 
AT3G27010.1     S - - - - - - - - - S A A T S N H H Q G G S L - - - - - - - - T A G L M I S H D L D G G S S S S G R P L N W G I G G G E
Os005399_Os01t0    S V A P S L P S P N S A L S R S H H H H H H M W A A A P P T A S A G F - - - - - - - A G A G F S G A - - D S G V I G G I
 
AT3G27010.1     G V S R S S L P T G L W P N V A G F G S G V P T T G L M S E G A G Y R I G F P G F D F P G V G H M S F A S I L G G N - -
Os005399_Os01t0    - M Q R M G I P A G I - - E L Q G G G A G - - - - G L G G G G G G - - - - - - - - - - - G G G H I G F A P M F A S H A A
 
AT3G27010.1     - H N Q M P G L E L G L S Q E G N V G V L N P Q S F T Q I Y Q Q M G Q A - Q A Q A Q G R V L H H M H H N H E E H Q Q E S
Os005399_Os01t0    A A A A M P G L E L G L S Q D G H I G V L A A Q S L S Q F Y H Q V G A A G Q L Q H Q - - - - - H Q H H H Q Q Q Q Q Q Q D
 
AT3G27010.1     G E - - K D D S Q G - - - S G R
Os005399_Os01t0    G E D N R D D G E S D E E S G Q
 
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