fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026383 AAAMPGLELGLSQDGH in 258/464 AT3G27010.1 1st_1st 0.349802371 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G27010.1     MDPKNLNRHQVPNFLNPPPPPRNQGLVDDDAASAVV-SDENRKPTTEIKDFQIVVSASDK
Sb026383_Sorbi1 ------TKRSPPPRRPPPPRPRSS-----SSSSWILRTTSSRRSSTTCKS----KSTSRR
                      .::. *    *** **..     .::* :: : ..*:.:*  *.     *:* :

AT3G27010.1     EPNKKSQNQNQLGPKR-----SSNKDRHTKVEGRGRRIRMP-----------ALCAARIF
Sb026383_Sorbi1 RSSSSSRTEARSSSCRWWRSPGSGGSRRSRPSGAPTRTATPRSTAGAAGSGCPRCAPRGS
                .....*:.: : .. *     .*. .*::: .*   *   *           . **.*  

AT3G27010.1     QLTRELGHKSDGETIQ---------------------WLLQQAEPS--------------
Sb026383_Sorbi1 SSSR--GNSATSPTARPCSGCCSRPSRPSSPPPAPAPYRRPRSHPSRPRSRRPPPGSPGR
                . :*  *:.: . * :                     :   ::.**              

AT3G27010.1     -----------------------------------IIAA---TGSGT---------IPAS
Sb026383_Sorbi1 TTTTTRTTCGRRPPRPRVSPRPPSSIPPPRARETPLVSADSCSGWGSPRVSSCREAAPLE
                                                   :::*   :* *:          * .

AT3G27010.1     ALASSAATSNHHQGGSLTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPTGLWPN
Sb026383_Sorbi1 APSALAATS-----ALRPCSLDTPRPCRGSSSASRRT---ATSACSQRSRSASSTTKWVL
                * :: ****     .  ...*  .:   *.**:* *.   . .. .  ***: .*  *  

AT3G27010.1     VAGFG-----SGVPTTGLMSEGAGY---RIGFPG----------------FDFPGVGHMS
Sb026383_Sorbi1 LAAAARCSTRTATSITIISSRRTGRTTARTASPMTSLGSSVVVQLQPCVFWVFPQVKEGK
                :*. .     :... * : *. :*    * . *                 : ** * . .

AT3G27010.1     FASILGGNHNQM-----------------------PGLELGLSQEGNVGVLNPQSFTQIY
Sb026383_Sorbi1 ERKVYACSHGMLLLLLDCCSSSCDGFLSSFFSRVVSKLNGGLSCSED---LPPRDHPQFF
                  .: . .*. :                       . *: *** . :   * *:...*::

AT3G27010.1     QQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGSGR
Sb026383_Sorbi1 PQ---------------SHGVDDRHSLLS----DFQVYNS
                 *                *  .:.*.  *    * *  .
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     M D P K N L N R H Q V P N F L N P P P P P R N Q G L V D D D A A S A V V - S D E N R K P T T E I K D F Q I V V S A S D K
Sb026383_Sorbi1    - - - - - - T K R S P P P R R P P P P R P R S S - - - - - S S S S W I L R T T S S R R S S T T C K S - - - - K S T S R R
 
AT3G27010.1     E P N K K S Q N Q N Q L G P K R - - - - - S S N K D R H T K V E G R G R R I R M P - - - - - - - - - - - A L C A A R I F
Sb026383_Sorbi1    R S S S S S R T E A R S S S C R W W R S P G S G G S R R S R P S G A P T R T A T P R S T A G A A G S G C P R C A P R G S
 
AT3G27010.1     Q L T R E L G H K S D G E T I Q - - - - - - - - - - - - - - - - - - - - - W L L Q Q A E P S - - - - - - - - - - - - - -
Sb026383_Sorbi1    S S S R - - G N S A T S P T A R P C S G C C S R P S R P S S P P P A P A P Y R R P R S H P S R P R S R R P P P G S P G R
 
AT3G27010.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I I A A - - - T G S G T - - - - - - - - - I P A S
Sb026383_Sorbi1    T T T T T R T T C G R R P P R P R V S P R P P S S I P P P R A R E T P L V S A D S C S G W G S P R V S S C R E A A P L E
 
AT3G27010.1     A L A S S A A T S N H H Q G G S L T A G L M I S H D L D G G S S S S G R P L N W G I G G G E G V S R S S L P T G L W P N
Sb026383_Sorbi1    A P S A L A A T S - - - - - A L R P C S L D T P R P C R G S S S A S R R T - - - A T S A C S Q R S R S A S S T T K W V L
 
AT3G27010.1     V A G F G - - - - - S G V P T T G L M S E G A G Y - - - R I G F P G - - - - - - - - - - - - - - - - F D F P G V G H M S
Sb026383_Sorbi1    L A A A A R C S T R T A T S I T I I S S R R T G R T T A R T A S P M T S L G S S V V V Q L Q P C V F W V F P Q V K E G K
 
AT3G27010.1     F A S I L G G N H N Q M - - - - - - - - - - - - - - - - - - - - - - - P G L E L G L S Q E G N V G V L N P Q S F T Q I Y
Sb026383_Sorbi1    E R K V Y A C S H G M L L L L L D C C S S S C D G F L S S F F S R V V S K L N G G L S C S E D - - - L P P R D H P Q F F
 
AT3G27010.1     Q Q M G Q A Q A Q A Q G R V L H H M H H N H E E H Q Q E S G E K D D S Q G S G R
Sb026383_Sorbi1    P Q - - - - - - - - - - - - - - - S H G V D D R H S L L S - - - - D F Q V Y N S
 
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