fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043967 AQHMPGLELGLSQDGH in 280/345 AT3G27010.1 not_1st 0.438735177 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G27010.1     MDPKNLNRHQ-------VPNFLNPPPPPRNQGLVDDDAASAVVSDENRKPTTEIKDFQIV
gm043967_Glyma1 MDPKG-SKQQPQQSQEVVPNFLS--LPQQQQGNTNNNNMG-----EN-KP-AEVKDFQIV
                ****. .::*       *****.   * ::** .:::  .     ** ** :*:******

AT3G27010.1     VSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKS
gm043967_Glyma1 V-AENKEESKK--QQQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKS
                * *.:** .**  :*:**.*****************************************

AT3G27010.1     DGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSLTAGLMISH----DLD
gm043967_Glyma1 DGETIQWLLQQAEPSIIAATGTGTIPASALA-AAGNSLSPQAASLSSSLH-QHQQKIDEL
                *********************:********* :*..*   *..**::.*  .*    *  

AT3G27010.1     GGSSSSGRPLNWGIGGGE--------GVSRSSLPTGLW-PNVAGFG------SGVPTT--
gm043967_Glyma1 GGSGGSSSRASWQMVGGNLGRPHLGVGVATAA---GLWPPHVSGFGFQTPPTTTTPTTTT
                ***..*.   .* : **:        **: ::   *** *:*:***      : .***  

AT3G27010.1     --------GLMSEGAGY--RIGFPGFDFPG-----VGHMSFASIL----GGNHNQMPGLE
gm043967_Glyma1 SSSGPSNATLATESSNYLQKIAFPGFDLPTSATNMMGHMSFTSILGGGGGGGAQHMPGLE
                         * :*.:.*  :*.*****:*      :*****:***    **. ::*****

AT3G27010.1     LGLSQEGNVGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMH-HNHEEHQ-----QESGEKD
gm043967_Glyma1 LGLSQDGHIGVLNQQALNQIYQQMNQA-----GRVHHHQHQHHHQHHQQQQHHQQTPAKD
                *****:*::**** *::.******.**     *** ** * *:*:.**     *::  **

AT3G27010.1     DSQGSGR-
gm043967_Glyma1 DSQGSGGQ
                ******
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     M D P K N L N R H Q - - - - - - - V P N F L N P P P P P R N Q G L V D D D A A S A V V S D E N R K P T T E I K D F Q I V
gm043967_Glyma1    M D P K G - S K Q Q P Q Q S Q E V V P N F L S - - L P Q Q Q Q G N T N N N N M G - - - - - E N - K P - A E V K D F Q I V
 
AT3G27010.1     V S A S D K E P N K K S Q N Q N Q L G P K R S S N K D R H T K V E G R G R R I R M P A L C A A R I F Q L T R E L G H K S
gm043967_Glyma1    V - A E N K E E S K K - - Q Q Q Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C A A R I F Q L T R E L G H K S
 
AT3G27010.1     D G E T I Q W L L Q Q A E P S I I A A T G S G T I P A S A L A S S A A T S N H H Q G G S L T A G L M I S H - - - - D L D
gm043967_Glyma1    D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A - A A G N S L S P Q A A S L S S S L H - Q H Q Q K I D E L
 
AT3G27010.1     G G S S S S G R P L N W G I G G G E - - - - - - - - G V S R S S L P T G L W - P N V A G F G - - - - - - S G V P T T - -
gm043967_Glyma1    G G S G G S S S R A S W Q M V G G N L G R P H L G V G V A T A A - - - G L W P P H V S G F G F Q T P P T T T T P T T T T
 
AT3G27010.1     - - - - - - - - G L M S E G A G Y - - R I G F P G F D F P G - - - - - V G H M S F A S I L - - - - G G N H N Q M P G L E
gm043967_Glyma1    S S S G P S N A T L A T E S S N Y L Q K I A F P G F D L P T S A T N M M G H M S F T S I L G G G G G G G A Q H M P G L E
 
AT3G27010.1     L G L S Q E G N V G V L N P Q S F T Q I Y Q Q M G Q A Q A Q A Q G R V L H H M H - H N H E E H Q - - - - - Q E S G E K D
gm043967_Glyma1    L G L S Q D G H I G V L N Q Q A L N Q I Y Q Q M N Q A - - - - - G R V H H H Q H Q H H H Q H H Q Q Q Q H H Q Q T P A K D
 
AT3G27010.1     D S Q G S G R -
gm043967_Glyma1    D S Q G S G G Q
 
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