fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27010.1 HNQMPGLELGLSQEGN at 250/314 in AT3G27010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051626 SQQMPGLELGLSQDGH in 269/330 AT3G27010.1 1st_1st 0.476284584 Ia
Gm043967 AQHMPGLELGLSQDGH in 280/345 AT3G27010.1 not_1st 0.438735177 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G27010.1     MDPKNLNR--HQ----VPNFLNPPPPP-RNQGLVDDDAASAVVSDENRKPTTEIKDFQIV
gm043967_Glyma1 MDPKGSKQQPQQSQEVVPNFLSLPQ---QQQGNTNNNNMG-----EN-KP-AEVKDFQIV
gm051626_Glyma1 MDPKGSKQ--QQPQEVVPKFLSLPQHHYQQQGNSNNNNMG-----EN-KP-SEVKDFQIV
                ****. ::  :*    **:**. *    ::**  :::  .     ** ** :*:******

AT3G27010.1     VSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKS
gm043967_Glyma1 V-AENKEESKK--QQQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKS
gm051626_Glyma1 V-AAEKDESKK---QQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKS
                * * :*: .**   *:**.*****************************************

AT3G27010.1     DGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSLTAGLMISH----DLD
gm043967_Glyma1 DGETIQWLLQQAEPSIIAATGTGTIPASALA-AAGNSLSPQAASLSSSLHQHQQKIDELG
gm051626_Glyma1 DGETIQWLLQQAEPSIIAATGTGTIPASALA-AAGNSLSPQGSSLSSALHHQHQKIDELG
                *********************:********* :*..*   *..**::.*   :    :*.

AT3G27010.1     GGSSSSGRPLNWGIGGGEGVSRSSL------PTGLW-PNVAGFG------SGVPTT----
gm043967_Glyma1 GSGGSSSRA-SWQMVGGN-LGRPHLGVGVATAAGLWPPHVSGFGFQTPPTTTTPTTTTSS
gm051626_Glyma1 CGSGGSSRA-SWQMVGGN-LGRPHLGVA---TTGLWPPHVSGFGFQ----TATTTTTTTS
                 ....*.*. .* : **: :.*. *      .:*** *:*:***      : ..**    

AT3G27010.1     ------GLMSEGAGY--RIGFPGFDFPG-----VGHMSFASIL----GGNHNQMPGLELG
gm043967_Glyma1 SGPSNATLATESSNYLQKIAFPGFDLPTSATNMMGHMSFTSILGGGGGGGAQHMPGLELG
gm051626_Glyma1 SGPSNATLATESSNYLQKIAFPGFDLPTSATN-MGHMSFTSIL---GGAGSQQMPGLELG
                       * :*.:.*  :*.*****:*      :*****:***    *.. ::*******

AT3G27010.1     LSQEGNVGVLNPQSFTQIYQQMG-QAQAQAQGRVLHHMHHN------HEEHQQESGEKDD
gm043967_Glyma1 LSQDGHIGVLNQQALNQIYQQMN---QA---GRVHHHQHQHHHQHHQQQQHHQQTPAKDD
gm051626_Glyma1 LSQDGHIGVLNPQALNQIYQQMNHQAQA---GRV-HQQHQH------QQQQHQQTPAKDD
                ***:*::**** *::.******.   **   *** *: *::      :::::*::  ***

AT3G27010.1     SQGSGR-
gm043967_Glyma1 SQGSGGQ
gm051626_Glyma1 SQGSGGQ
                *****
BoxShade v3.31 C (beta, 970507) Output
AT3G27010.1     M D P K N L N R - - H Q - - - - V P N F L N P P P P P - R N Q G L V D D D A A S A V V S D E N R K P T T E I K D F Q I V
gm043967_Glyma1    M D P K G S K Q Q P Q Q S Q E V V P N F L S L P Q - - - Q Q Q G N T N N N N M G - - - - - E N - K P - A E V K D F Q I V
gm051626_Glyma1    M D P K G S K Q - - Q Q P Q E V V P K F L S L P Q H H Y Q Q Q G N S N N N N M G - - - - - E N - K P - S E V K D F Q I V
 
AT3G27010.1     V S A S D K E P N K K S Q N Q N Q L G P K R S S N K D R H T K V E G R G R R I R M P A L C A A R I F Q L T R E L G H K S
gm043967_Glyma1    V - A E N K E E S K K - - Q Q Q Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C A A R I F Q L T R E L G H K S
gm051626_Glyma1    V - A A E K D E S K K - - - Q Q Q L A P K R S S N K D R H T K V E G R G R R I R M P A L C A A R I F Q L T R E L G H K S
 
AT3G27010.1     D G E T I Q W L L Q Q A E P S I I A A T G S G T I P A S A L A S S A A T S N H H Q G G S L T A G L M I S H - - - - D L D
gm043967_Glyma1    D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A - A A G N S L S P Q A A S L S S S L H Q H Q Q K I D E L G
gm051626_Glyma1    D G E T I Q W L L Q Q A E P S I I A A T G T G T I P A S A L A - A A G N S L S P Q G S S L S S A L H H Q H Q K I D E L G
 
AT3G27010.1     G G S S S S G R P L N W G I G G G E G V S R S S L - - - - - - P T G L W - P N V A G F G - - - - - - S G V P T T - - - -
gm043967_Glyma1    G S G G S S S R A - S W Q M V G G N - L G R P H L G V G V A T A A G L W P P H V S G F G F Q T P P T T T T P T T T T S S
gm051626_Glyma1    C G S G G S S R A - S W Q M V G G N - L G R P H L G V A - - - T T G L W P P H V S G F G F Q - - - - T A T T T T T T T S
 
AT3G27010.1     - - - - - - G L M S E G A G Y - - R I G F P G F D F P G - - - - - V G H M S F A S I L - - - - G G N H N Q M P G L E L G
gm043967_Glyma1    S G P S N A T L A T E S S N Y L Q K I A F P G F D L P T S A T N M M G H M S F T S I L G G G G G G G A Q H M P G L E L G
gm051626_Glyma1    S G P S N A T L A T E S S N Y L Q K I A F P G F D L P T S A T N - M G H M S F T S I L - - - G G A G S Q Q M P G L E L G
 
AT3G27010.1     L S Q E G N V G V L N P Q S F T Q I Y Q Q M G - Q A Q A Q A Q G R V L H H M H H N - - - - - - H E E H Q Q E S G E K D D
gm043967_Glyma1    L S Q D G H I G V L N Q Q A L N Q I Y Q Q M N - - - Q A - - - G R V H H H Q H Q H H H Q H H Q Q Q Q H H Q Q T P A K D D
gm051626_Glyma1    L S Q D G H I G V L N P Q A L N Q I Y Q Q M N H Q A Q A - - - G R V - H Q Q H Q H - - - - - - Q Q Q Q H Q Q T P A K D D
 
AT3G27010.1     S Q G S G R -
gm043967_Glyma1    S Q G S G G Q
gm051626_Glyma1    S Q G S G G Q
 
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