fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003079 not found in 235aa AT3G27650.1 1st_1st 0.549152542 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G27650.1     MPKRETKKIKPSQEVIKEGPFLVAIHLKGIYMSNYTNSPCAACKFLRRKCTSDCVFAPYF
pp003079_Pp1s71 -------------------------------MASSSSSPCAACKFLRRKCTAECVFAPYF
                                               *:. :.**************::*******

AT3G27650.1     PPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISV
pp003079_Pp1s71 PPDQPHKFANVHKIFGASNITKLLNELPTHQREDAVNSLAYEADARVKDPVYGCVGAISV
                **::* ******:******::*:*:*:..**************:**:*************

AT3G27650.1     LQRQVLRLQRELEETNADLMRYAGC-----------------------------------
pp003079_Pp1s71 LQRQVAQLQNDLAIAHSDLARYAGAGMVVPSVGQGGASSSLGIGISLSQGQANREHMLTR
                ***** :**.:*  :::** ****.                                   

AT3G27650.1     -----------------------------------------------------LGGETTS
pp003079_Pp1s71 EQLMDLARGDPSHLSREHLMELARAGGGTYETLQALGLSGALGPLRSFPSNSRSGGESGN
                                                                      ***: .

AT3G27650.1     AYGGRRG-------------------
pp003079_Pp1s71 RSGGGSGGGGGGGASASNTGGQIPSP
                  **  *
BoxShade v3.31 C (beta, 970507) Output
AT3G27650.1     M P K R E T K K I K P S Q E V I K E G P F L V A I H L K G I Y M S N Y T N S P C A A C K F L R R K C T S D C V F A P Y F
pp003079_Pp1s71    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S S S P C A A C K F L R R K C T A E C V F A P Y F
 
AT3G27650.1     P P E E P T K F A N V H R I F G A S N V S K I L H E V A P H Q R E D A V N S L A Y E A E A R L K D P V Y G C V G A I S V
pp003079_Pp1s71    P P D Q P H K F A N V H K I F G A S N I T K L L N E L P T H Q R E D A V N S L A Y E A D A R V K D P V Y G C V G A I S V
 
AT3G27650.1     L Q R Q V L R L Q R E L E E T N A D L M R Y A G C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp003079_Pp1s71    L Q R Q V A Q L Q N D L A I A H S D L A R Y A G A G M V V P S V G Q G G A S S S L G I G I S L S Q G Q A N R E H M L T R
 
AT3G27650.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L G G E T T S
pp003079_Pp1s71    E Q L M D L A R G D P S H L S R E H L M E L A R A G G G T Y E T L Q A L G L S G A L G P L R S F P S N S R S G G E S G N
 
AT3G27650.1     A Y G G R R G - - - - - - - - - - - - - - - - - - -
pp003079_Pp1s71    R S G G G S G G G G G G G A S A S N T G G Q I P S P
 
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