fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029537 not found in 161aa AT5G63090.4 1st_not 0.603389830 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G27650.1     MPKRETKKIKPSQEVIKEGPFLVAIHLKGIYMSNYTNSPCAACKFLRRKCTSDCVFAPYF
pt029537_POPTR_ -----------------------------MASSSYSNSPCAACKFLRRKCMPDCIFAPYF
                                             :  *.*:************** .**:*****

AT3G27650.1     PPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISV
pt029537_POPTR_ PPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARMKDPVYGCVGAISV
                ***** ******:*********:*:** ******************:*************

AT3G27650.1     LQRQVLRLQRELEETNADLMRYA------------------GCLGGETTSAY--------
pt029537_POPTR_ LQRQVIRLQKELDATNADLIRYACNEMPAANPQFGRRMGHGGVSYDQSSGIYYPSPWNND
                *****:***:**: *****:***                  *   .:::. *        

AT3G27650.1     -GGRRG----
pt029537_POPTR_ TCGERGDGSI
                  *.**
BoxShade v3.31 C (beta, 970507) Output
AT3G27650.1     M P K R E T K K I K P S Q E V I K E G P F L V A I H L K G I Y M S N Y T N S P C A A C K F L R R K C T S D C V F A P Y F
pt029537_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S Y S N S P C A A C K F L R R K C M P D C I F A P Y F
 
AT3G27650.1     P P E E P T K F A N V H R I F G A S N V S K I L H E V A P H Q R E D A V N S L A Y E A E A R L K D P V Y G C V G A I S V
pt029537_POPTR_    P P E E P Q K F A N V H K I F G A S N V S K L L N E V L P H Q R E D A V N S L A Y E A E A R M K D P V Y G C V G A I S V
 
AT3G27650.1     L Q R Q V L R L Q R E L E E T N A D L M R Y A - - - - - - - - - - - - - - - - - - G C L G G E T T S A Y - - - - - - - -
pt029537_POPTR_    L Q R Q V I R L Q K E L D A T N A D L I R Y A C N E M P A A N P Q F G R R M G H G G V S Y D Q S S G I Y Y P S P W N N D
 
AT3G27650.1     - G G R R G - - - -
pt029537_POPTR_    T C G E R G D G S I
 
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