fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007259 not found in 268aa AT5G63090.4 1st_not 0.532203389 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G27650.1     MPKRETKKIKPSQEVIKEGPFLVAIHLKGIYMSNYTN----SPCAACKFLRRKCTSDCVF
Sb007259_Sorbi1 -------MASPSSTSNNSA-------LSPVAASGATTPGAGAPCAACKFLRRKCLPGCVF
                         .**.   :..       *. :  *. *.    :************ ..***

AT3G27650.1     APYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVG
Sb007259_Sorbi1 APYFPPEEPQKFANVHKVFGASNVTKLLNELLPHQREDAVSSLAYEAEARVKDPVYGCVG
                ********* ******::******:*:*:*: ********.*********:*********

AT3G27650.1     AISVLQRQVLRLQRELEETNADLMRYA---------------------------------
Sb007259_Sorbi1 AISVLQRQVHRLQKELDAAHAELLRYACGDVAAGIPTALPVSVSVSAAPRLSTAMTTSPG
                ********* ***:**: ::*:*:***                                 

AT3G27650.1     ---------------------------------------GC-------------------
Sb007259_Sorbi1 QFAAAAATAHATAGMYGSSRRLGVLDGVVAAPPPPPPAGGCYFMRNHSNVISSPPGADVA
                                                       **                   

AT3G27650.1     ---------------LGGETTSAYGG--------RRG-----
Sb007259_Sorbi1 PVLPYASMANWAVNAISASTTTTSGSESIGGLDHKEGGDSSM
                               :...**:: *.        :.*
BoxShade v3.31 C (beta, 970507) Output
AT3G27650.1     M P K R E T K K I K P S Q E V I K E G P F L V A I H L K G I Y M S N Y T N - - - - S P C A A C K F L R R K C T S D C V F
Sb007259_Sorbi1    - - - - - - - M A S P S S T S N N S A - - - - - - - L S P V A A S G A T T P G A G A P C A A C K F L R R K C L P G C V F
 
AT3G27650.1     A P Y F P P E E P T K F A N V H R I F G A S N V S K I L H E V A P H Q R E D A V N S L A Y E A E A R L K D P V Y G C V G
Sb007259_Sorbi1    A P Y F P P E E P Q K F A N V H K V F G A S N V T K L L N E L L P H Q R E D A V S S L A Y E A E A R V K D P V Y G C V G
 
AT3G27650.1     A I S V L Q R Q V L R L Q R E L E E T N A D L M R Y A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb007259_Sorbi1    A I S V L Q R Q V H R L Q K E L D A A H A E L L R Y A C G D V A A G I P T A L P V S V S V S A A P R L S T A M T T S P G
 
AT3G27650.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G C - - - - - - - - - - - - - - - - - - -
Sb007259_Sorbi1    Q F A A A A A T A H A T A G M Y G S S R R L G V L D G V V A A P P P P P P A G G C Y F M R N H S N V I S S P P G A D V A
 
AT3G27650.1     - - - - - - - - - - - - - - - L G G E T T S A Y G G - - - - - - - - R R G - - - - -
Sb007259_Sorbi1    P V L P Y A S M A N W A V N A I S A S T T T T S G S E S I G G L D H K E G G D S S M
 
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