fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G27650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051367 not found in 166aa AT3G27650.1 not_1st 0.596610169 II
Gm051368 not found in 150aa AT3G27650.1 not_1st 0.596610169 II
Gm044124 not found in 144aa AT3G27650.1 not_1st 0.589830508 II
Gm011722 not found in 149aa AT3G27650.1 not_1st 0.508474576 II
Gm001337 not found in 108aa AT3G27650.1 not_1st 0.488135593 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G27650.1     --MPKRETKKIKPSQEVIKEGPFLVAIHLKGIYMSNYTNSPCAACKFLRRKCTSDCVFAP
gm044124_Glyma1 -------------------------------MASSSYSNSPCAACKFLRRKCMPDCIFAP
gm011722_Glyma0 ----------------------------------------------------MPDCIFAP
gm051368_Glyma1 -------------------------------MASSSYSNSPCAACKFLRRKCMPDCIFSP
gm001337_Glyma0 -------------------------------MASSSYSNSPCDACKFL-RKCMMDCIFSP
gm051367_Glyma1 MLLPKKEVAG---------------CVLEKIMASSSYSNSPCAACKFLRRKCMPDCIFSP
                                                                      **:*:*

AT3G27650.1     YFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAI
gm044124_Glyma1 YFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAI
gm011722_Glyma0 YFPPEEPHKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAI
gm051368_Glyma1 YFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAI
gm001337_Glyma0 YFPPKEPQKFANMHKIFGACNVSKLQNEVQPYQREDAVNSLAYEAEAWIEDPVYGCVGAI
gm051367_Glyma1 YFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAI
                ****:** ****:*:****.****: :** *:*************** ::**********

AT3G27650.1     SVLQR-QVLRLQRELEETNADLMRYAGCL---------------------GGETT-----
gm044124_Glyma1 SVLQR-QVIRLQKELDATSADLIR--------------------------GGSSLGQS--
gm011722_Glyma0 SVLQK-QVLRLQKELDATNADLIRYSACNEIPNTTTHHGGRRMSDDGGG-GGSSLAHS--
gm051368_Glyma1 SVLQR-QVIRLQKELDATNADLIRYT-CNEMPTT---QDGRRIIGEGDGDGGSSLGQSPE
gm001337_Glyma0 SVLLKVQILHQHRERTFVQM----------------------------------------
gm051367_Glyma1 SVLQR-QVIRLQKELDATNADLIRYT-CNEMPTT---QDGRRIIGEGDGDGGSSLGQSPE
                *** : *::: ::*   ..                                         

AT3G27650.1     -SAY---------------GGRRG---
gm044124_Glyma1 -SGYYYPSPWNNDTLG--DGYHRGDNI
gm011722_Glyma0 -HGFYYPSNWNNDPCGNSNGYPRG-DI
gm051368_Glyma1 VTIY---------------------NI
gm001337_Glyma0 ---------------------------
gm051367_Glyma1 VTIY---------------------NI
BoxShade v3.31 C (beta, 970507) Output
AT3G27650.1     - - M P K R E T K K I K P S Q E V I K E G P F L V A I H L K G I Y M S N Y T N S P C A A C K F L R R K C T S D C V F A P
gm044124_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S Y S N S P C A A C K F L R R K C M P D C I F A P
gm011722_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M P D C I F A P
gm051368_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S Y S N S P C A A C K F L R R K C M P D C I F S P
gm001337_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S Y S N S P C D A C K F L - R K C M M D C I F S P
gm051367_Glyma1    M L L P K K E V A G - - - - - - - - - - - - - - - C V L E K I M A S S S Y S N S P C A A C K F L R R K C M P D C I F S P
 
AT3G27650.1     Y F P P E E P T K F A N V H R I F G A S N V S K I L H E V A P H Q R E D A V N S L A Y E A E A R L K D P V Y G C V G A I
gm044124_Glyma1    Y F P P E E P Q K F A N V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I
gm011722_Glyma0    Y F P P E E P H K F A N V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I
gm051368_Glyma1    Y F P P E E P Q K F A N V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I
gm001337_Glyma0    Y F P P K E P Q K F A N M H K I F G A C N V S K L Q N E V Q P Y Q R E D A V N S L A Y E A E A W I E D P V Y G C V G A I
gm051367_Glyma1    Y F P P E E P Q K F A N V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I
 
AT3G27650.1     S V L Q R - Q V L R L Q R E L E E T N A D L M R Y A G C L - - - - - - - - - - - - - - - - - - - - - G G E T T - - - - -
gm044124_Glyma1    S V L Q R - Q V I R L Q K E L D A T S A D L I R - - - - - - - - - - - - - - - - - - - - - - - - - - G G S S L G Q S - -
gm011722_Glyma0    S V L Q K - Q V L R L Q K E L D A T N A D L I R Y S A C N E I P N T T T H H G G R R M S D D G G G - G G S S L A H S - -
gm051368_Glyma1    S V L Q R - Q V I R L Q K E L D A T N A D L I R Y T - C N E M P T T - - - Q D G R R I I G E G D G D G G S S L G Q S P E
gm001337_Glyma0    S V L L K V Q I L H Q H R E R T F V Q M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm051367_Glyma1    S V L Q R - Q V I R L Q K E L D A T N A D L I R Y T - C N E M P T T - - - Q D G R R I I G E G D G D G G S S L G Q S P E
 
AT3G27650.1     - S A Y - - - - - - - - - - - - - - - G G R R G - - -
gm044124_Glyma1    - S G Y Y Y P S P W N N D T L G - - D G Y H R G D N I
gm011722_Glyma0    - H G F Y Y P S N W N N D P C G N S N G Y P R G - D I
gm051368_Glyma1    V T I Y - - - - - - - - - - - - - - - - - - - - - N I
gm001337_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm051367_Glyma1    V T I Y - - - - - - - - - - - - - - - - - - - - - N I
 
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