fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035012 not found in 314aa AT3G28470.1 not_1st 0.452269170 II
Pt023229 not found in 354aa AT3G28470.1 not_1st 0.403755868 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
gm035012_Glyma1 MGRPPCCDKSNVKRGLWTPEEDAKILAYVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNY
pt023229_POPTR_ MVRPPCCDRLNVKRGLWTAEEDAKMLAHVAKHGTGNWTAVPKKAGLQRCGKSCRLRWTNY
                * ******: ***:**** *****:**:** **.***: :******:*************

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
gm035012_Glyma1 LRPDLKHDGFTPQEEDLIINLHGAIGSRWSLIAKRLPGRTDNDVKNYWNTKLRKKLMKMG
pt023229_POPTR_ LRPDLKHDSFTPQEEEMIIRLHAAIGSRWSIIAQQLPGRTDNDVKNYWNARLRKKLSEMG
                ********.*:.***::**. * ******* **::***********:**::*:*** :**

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGH-------------------------GNAS---------
gm035012_Glyma1 IDPVTHKPVSQVLSDLGSISGL-------------------------PNTTNQMAFINKD
pt023229_POPTR_ IDPVTHKPFSKILADYGNIGGLIKYGSRIGSLSRGLKNVFTLKPEQYPFTPEGMSNINSH
                ********.*::*::  .*.*                            :.         

AT3G28470.1     --------FKTEPSNNSILTQSNSAWEMMRNTTTNHESYYTNSPMMFTNSSEYQTTPFHF
gm035012_Glyma1 LMMSNMPPTKTEPSDSN-------------------KSMVEHTQEVIINSENVQP-----
pt023229_POPTR_ LMTTTVP-PKMESNQECFL-----------NIMYNNDANSNHSLDLL---DQLQAI----
                         * *..:.                    .:   ::  ::   .: *.     

AT3G28470.1     YSHPNHLLNGTTSSCSSSSSS--TSITQPN----QVPQT----PV------TNFYWSDFL
gm035012_Glyma1 -----QVLSEAASSTSSSSSSNLTQLGSPQSYSCQTPQAQISPPC------SSFDWSEFL
pt023229_POPTR_ -----KLVTEASSTCTAY----------------QTIPA----PCILDESSTSFSWCDFL
                     :::. ::*: ::                 *.  :    *       :.* *.:**

AT3G28470.1     LSD------------------------PVPQVVGS-SATSDLTFTQNEHHFNIEAEYISQ
gm035012_Glyma1 HSDSF-----------------NWSLNPPSGLMQS-EAELSDNTKSNGHDM--------Q
pt023229_POPTR_ LEDEYLPAEQENAAEFSSKDLTNQTQNPNVMIPQSFQSNTEVNAGVNGMDLALQSN---T
                 .*                        *   :  * .:  . .   *  .:         

AT3G28470.1     NIDSKASGTCHSASSFVDEILDKDQEMLSQFPQLLN-DFDY
gm035012_Glyma1 GAASEGSGS-GSAHSFVDGILDRDSEIRAAFPQLLDASFDY
pt023229_POPTR_ GSDDQVASSSSQHSSFVETIMDGESKIFLDFPNLLEEIFYY
                .  .: :.:  .  ***: *:* :.::   **:**:  * *
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
gm035012_Glyma1    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V A N H G T G N W T L V P K K A G L N R C G K S C R L R W T N Y
pt023229_POPTR_    M V R P P C C D R L N V K R G L W T A E E D A K M L A H V A K H G T G N W T A V P K K A G L Q R C G K S C R L R W T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
gm035012_Glyma1    L R P D L K H D G F T P Q E E D L I I N L H G A I G S R W S L I A K R L P G R T D N D V K N Y W N T K L R K K L M K M G
pt023229_POPTR_    L R P D L K H D S F T P Q E E E M I I R L H A A I G S R W S I I A Q Q L P G R T D N D V K N Y W N A R L R K K L S E M G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H - - - - - - - - - - - - - - - - - - - - - - - - - G N A S - - - - - - - - -
gm035012_Glyma1    I D P V T H K P V S Q V L S D L G S I S G L - - - - - - - - - - - - - - - - - - - - - - - - - P N T T N Q M A F I N K D
pt023229_POPTR_    I D P V T H K P F S K I L A D Y G N I G G L I K Y G S R I G S L S R G L K N V F T L K P E Q Y P F T P E G M S N I N S H
 
AT3G28470.1     - - - - - - - - F K T E P S N N S I L T Q S N S A W E M M R N T T T N H E S Y Y T N S P M M F T N S S E Y Q T T P F H F
gm035012_Glyma1    L M M S N M P P T K T E P S D S N - - - - - - - - - - - - - - - - - - - K S M V E H T Q E V I I N S E N V Q P - - - - -
pt023229_POPTR_    L M T T T V P - P K M E S N Q E C F L - - - - - - - - - - - N I M Y N N D A N S N H S L D L L - - - D Q L Q A I - - - -
 
AT3G28470.1     Y S H P N H L L N G T T S S C S S S S S S - - T S I T Q P N - - - - Q V P Q T - - - - P V - - - - - - T N F Y W S D F L
gm035012_Glyma1    - - - - - Q V L S E A A S S T S S S S S S N L T Q L G S P Q S Y S C Q T P Q A Q I S P P C - - - - - - S S F D W S E F L
pt023229_POPTR_    - - - - - K L V T E A S S T C T A Y - - - - - - - - - - - - - - - - Q T I P A - - - - P C I L D E S S T S F S W C D F L
 
AT3G28470.1     L S D - - - - - - - - - - - - - - - - - - - - - - - - P V P Q V V G S - S A T S D L T F T Q N E H H F N I E A E Y I S Q
gm035012_Glyma1    H S D S F - - - - - - - - - - - - - - - - - N W S L N P P S G L M Q S - E A E L S D N T K S N G H D M - - - - - - - - Q
pt023229_POPTR_    L E D E Y L P A E Q E N A A E F S S K D L T N Q T Q N P N V M I P Q S F Q S N T E V N A G V N G M D L A L Q S N - - - T
 
AT3G28470.1     N I D S K A S G T C H S A S S F V D E I L D K D Q E M L S Q F P Q L L N - D F D Y
gm035012_Glyma1    G A A S E G S G S - G S A H S F V D G I L D R D S E I R A A F P Q L L D A S F D Y
pt023229_POPTR_    G S D D Q V A S S S S Q H S S F V E T I M D G E S K I F L D F P N L L E E I F Y Y
 
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