fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050969 not found in 313aa AT3G28470.1 1st_1st 0.453834115 Ia
Pt003280 not found in 380aa AT3G28470.1 1st_1st 0.444444444 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
pt003280_POPTR_ MGRPPCCDKSNVKRGLWTPEEDAKILAYVSNHGIGNWTSVPKKAGLNRCGKSCRLRWTNY
gm050969_Glyma1 MGRPPCCDKSNVKRGLWTPEEDAKILAYVVNHGTGNWTLVPKKAGLNRCGKSCRLRWTNY
                *************:**** **********  ** ***: :********************

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
pt003280_POPTR_ LRPDLKHERFAPEEEELIIKLHKAIGSRWSLIAKKLPGRTDNDVKNYWNTKLRKMLQKMG
gm050969_Glyma1 LRPDLKHDGFTPQEEELIINLHGAIGSRWSIIAKRLPGRTDNDVKNYWNTKLRKKLMKMG
                *******: *:.:******: * ******* **::***********:*****:* * ***

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGHGNASF-------------------KTEPSNNS------
pt003280_POPTR_ IDPVTHKPFSQIFSDFGNISGISNTGN-----LNKSLNTSLM-----SEP-----DHQFS
gm050969_Glyma1 IDPVTHKPVSQVLSDLGSISGLPNTTTNQIAFINKDLMMSNMLPITKTEPSVPSWEHHIP
                ********.**::::: .***  *:                      :**          

AT3G28470.1     ---ILTQSNSAW-EMMRNTTTNHESYYTNSPMMFTNSSEY-----QTTPFHFYSHPNHLL
pt003280_POPTR_ SAILTTPEHSCFKKTMEQQVQEYNPTVTH-PTSWDFLAQFPVHDTKQLPLFF----NEVS
gm050969_Glyma1 YQVIINSEN----------IQSH-----------------------------------VL
                   : . .:            .:                                   : 

AT3G28470.1     NGTTSSCSSSSSSTSITQPN-------QVPQ----TPVTNFYWSDFLLSDPV--------
pt003280_POPTR_ SSCPSSTPSSSSTSTFT-----QSYSCQKSQAPLITPTCTFTCTEFLLSDPVSSTEFQHQ
gm050969_Glyma1 SEAASST-SSSSSSNITQLGSPQSYSCQTPQAQIAPPCSSFDWSEFLQSDSF--------
                .  .**  ****::.:*          * .*    .*  .*  ::** **..        

AT3G28470.1     ------PQVVGSSATSDLTFTQN---------------------------EHHFNIEAEY
pt003280_POPTR_ QEQYDFDEMFSPTNSSTMAMAQNDVSSCNITSTGSDDDWYLNRSVGRSTYDHGTVNNGLE
gm050969_Glyma1 -------------------------------------NWSLNPSSGIIQSEAELSNNAKS
                                                                  :     :.  

AT3G28470.1     ISQNIDSKASGTCHSASSFVDEILDKDQEMLSQFPQLLN-DFDY-
pt003280_POPTR_ ENNNAADHAAYYSSSASSFVDGILDKDRELHSQFPPLLDPSFDCY
gm050969_Glyma1 NGNDMQGGASEGSGSAHSFVDGILDRDSEIRAAFPELLDASFDC-
                 .::  . *:  . ** **** ***:* *: : ** **: .**
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
pt003280_POPTR_    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V S N H G I G N W T S V P K K A G L N R C G K S C R L R W T N Y
gm050969_Glyma1    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V V N H G T G N W T L V P K K A G L N R C G K S C R L R W T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
pt003280_POPTR_    L R P D L K H E R F A P E E E E L I I K L H K A I G S R W S L I A K K L P G R T D N D V K N Y W N T K L R K M L Q K M G
gm050969_Glyma1    L R P D L K H D G F T P Q E E E L I I N L H G A I G S R W S I I A K R L P G R T D N D V K N Y W N T K L R K K L M K M G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H G N A S F - - - - - - - - - - - - - - - - - - - K T E P S N N S - - - - - -
pt003280_POPTR_    I D P V T H K P F S Q I F S D F G N I S G I S N T G N - - - - - L N K S L N T S L M - - - - - S E P - - - - - D H Q F S
gm050969_Glyma1    I D P V T H K P V S Q V L S D L G S I S G L P N T T T N Q I A F I N K D L M M S N M L P I T K T E P S V P S W E H H I P
 
AT3G28470.1     - - - I L T Q S N S A W - E M M R N T T T N H E S Y Y T N S P M M F T N S S E Y - - - - - Q T T P F H F Y S H P N H L L
pt003280_POPTR_    S A I L T T P E H S C F K K T M E Q Q V Q E Y N P T V T H - P T S W D F L A Q F P V H D T K Q L P L F F - - - - N E V S
gm050969_Glyma1    Y Q V I I N S E N - - - - - - - - - - I Q S H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V L
 
AT3G28470.1     N G T T S S C S S S S S S T S I T Q P N - - - - - - - Q V P Q - - - - T P V T N F Y W S D F L L S D P V - - - - - - - -
pt003280_POPTR_    S S C P S S T P S S S S T S T F T - - - - - Q S Y S C Q K S Q A P L I T P T C T F T C T E F L L S D P V S S T E F Q H Q
gm050969_Glyma1    S E A A S S T - S S S S S S N I T Q L G S P Q S Y S C Q T P Q A Q I A P P C S S F D W S E F L Q S D S F - - - - - - - -
 
AT3G28470.1     - - - - - - P Q V V G S S A T S D L T F T Q N - - - - - - - - - - - - - - - - - - - - - - - - - - - E H H F N I E A E Y
pt003280_POPTR_    Q E Q Y D F D E M F S P T N S S T M A M A Q N D V S S C N I T S T G S D D D W Y L N R S V G R S T Y D H G T V N N G L E
gm050969_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N W S L N P S S G I I Q S E A E L S N N A K S
 
AT3G28470.1     I S Q N I D S K A S G T C H S A S S F V D E I L D K D Q E M L S Q F P Q L L N - D F D Y -
pt003280_POPTR_    E N N N A A D H A A Y Y S S S A S S F V D G I L D K D R E L H S Q F P P L L D P S F D C Y
gm050969_Glyma1    N G N D M Q G G A S E G S G S A H S F V D G I L D R D S E I R A A F P E L L D A S F D C -
 
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