fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012587 not found in 306aa AT3G28470.1 1st_1st 0.339593114 Ib
Sb002167 not found in 328aa AT3G28470.1 1st_1st 0.338028169 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
Os012587_Os03t0 MGRPPCCDKANVKKGPWTAEEDAKLLAYTSTHGTGNWTSVPQRAGLKRCGKSCRLRYTNY
Sb002167_Sorbi1 MGRPPCCDKANVKKGPWTPEEDAKLLAYTSTHGTGNWTNVPQRAGLKRCGKSCRLRYTNY
                *********:***** ** *****:***.: **.***: :*::***:*********:***

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
Os012587_Os03t0 LRPNLKHENFTQEEEELIVTLHAMLGSRWSLIANQLPGRTDNDVKNYWNTKLSKKLRQRG
Sb002167_Sorbi1 LRPNLKHENFTQEEEDLIVTLHAMLGSRWSLIANQLPGRTDNDVKNYWNTKLSKKLRQRG
                ***:***:.*: :**:**:  *  :***** **.:***********:*****.*** : *

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGHGNASFKTEPSNNSILTQSNSAWEMMRNTTTNHESYYTN
Os012587_Os03t0 IDPITHRPIADLM--------QSIGTLAIRPP-------PAAGAAPPPCLPVFHDAPYFA
Sb002167_Sorbi1 IDPITHRPIADLM--------HSIGALAIRPPQPAS-SSPNGGYLPAPALPLVHDVAYHA
                ***:**:*:::*:        :. .::  .*.       . ..       .  *:  *  

AT3G28470.1     SPMMFTNSSEYQTTPFHFYSHPNHLLNGTTSSCSSSSSSTSITQPNQVPQTPVTNFYWSD
Os012587_Os03t0 A--LQHQHQQQQVV------------THVDADAPASPDS----QHLQLN--------WSD
Sb002167_Sorbi1 AGMLPPKTEQQQVV-----------IARVDADAPASPTTTEHGQGQQLK--------WSD
                :  :  : .: *..              . :...:*. :    *  *:         ***

AT3G28470.1     FLLSDPVPQVVGSSA-TSDLTFTQNEHHFNIEAE----------------YISQNIDSK-
Os012587_Os03t0 FLADDAAGHGADAPA--PQAALGQY-QEGSAPAA---TAVVGGGR------AFGDVDGAS
Sb002167_Sorbi1 FLADDAAAAAAAAEAQQQQVVLGQYHHEASAVGAGSGVAVYGAGSSSSAAAAGGDVGG--
                ** .*..   . : *   : .: *  :. .  .                     ::..  

AT3G28470.1     ---ASGTCHS---ASSFVDEILDKDQEM-LSQF-PQLLNDFDY-----------------
Os012587_Os03t0 AGVGAGTDDGAGAASAFIDAILDCDKEMGVDQLIAEMLADPAYYGGGGGSSSSELGWGC-
Sb002167_Sorbi1 ---GGGGDDG---AAAFIDAILDCDKETGVDQLIAELLADPAYY-AGSSSSSSEMGWGMG
                   ..*  ..   *::*:* *** *:*  :.*: .::* *  *                 

AT3G28470.1     -----
Os012587_Os03t0 -----
Sb002167_Sorbi1 LLNAD
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
Os012587_Os03t0    M G R P P C C D K A N V K K G P W T A E E D A K L L A Y T S T H G T G N W T S V P Q R A G L K R C G K S C R L R Y T N Y
Sb002167_Sorbi1    M G R P P C C D K A N V K K G P W T P E E D A K L L A Y T S T H G T G N W T N V P Q R A G L K R C G K S C R L R Y T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
Os012587_Os03t0    L R P N L K H E N F T Q E E E E L I V T L H A M L G S R W S L I A N Q L P G R T D N D V K N Y W N T K L S K K L R Q R G
Sb002167_Sorbi1    L R P N L K H E N F T Q E E E D L I V T L H A M L G S R W S L I A N Q L P G R T D N D V K N Y W N T K L S K K L R Q R G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H G N A S F K T E P S N N S I L T Q S N S A W E M M R N T T T N H E S Y Y T N
Os012587_Os03t0    I D P I T H R P I A D L M - - - - - - - - Q S I G T L A I R P P - - - - - - - P A A G A A P P P C L P V F H D A P Y F A
Sb002167_Sorbi1    I D P I T H R P I A D L M - - - - - - - - H S I G A L A I R P P Q P A S - S S P N G G Y L P A P A L P L V H D V A Y H A
 
AT3G28470.1     S P M M F T N S S E Y Q T T P F H F Y S H P N H L L N G T T S S C S S S S S S T S I T Q P N Q V P Q T P V T N F Y W S D
Os012587_Os03t0    A - - L Q H Q H Q Q Q Q V V - - - - - - - - - - - - T H V D A D A P A S P D S - - - - Q H L Q L N - - - - - - - - W S D
Sb002167_Sorbi1    A G M L P P K T E Q Q Q V V - - - - - - - - - - - I A R V D A D A P A S P T T T E H G Q G Q Q L K - - - - - - - - W S D
 
AT3G28470.1     F L L S D P V P Q V V G S S A - T S D L T F T Q N E H H F N I E A E - - - - - - - - - - - - - - - - Y I S Q N I D S K -
Os012587_Os03t0    F L A D D A A G H G A D A P A - - P Q A A L G Q Y - Q E G S A P A A - - - T A V V G G G R - - - - - - A F G D V D G A S
Sb002167_Sorbi1    F L A D D A A A A A A A A E A Q Q Q Q V V L G Q Y H H E A S A V G A G S G V A V Y G A G S S S S A A A A G G D V G G - -
 
AT3G28470.1     - - - A S G T C H S - - - A S S F V D E I L D K D Q E M - L S Q F - P Q L L N D F D Y - - - - - - - - - - - - - - - - -
Os012587_Os03t0    A G V G A G T D D G A G A A S A F I D A I L D C D K E M G V D Q L I A E M L A D P A Y Y G G G G G S S S S E L G W G C -
Sb002167_Sorbi1    - - - G G G G D D G - - - A A A F I D A I L D C D K E T G V D Q L I A E L L A D P A Y Y - A G S S S S S S E M G W G M G
 
AT3G28470.1     - - - - -
Os012587_Os03t0    - - - - -
Sb002167_Sorbi1    L L N A D
 
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