fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023229 not found in 354aa AT3G28470.1 not_1st 0.403755868 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
pt023229_POPTR_ MVRPPCCDRLNVKRGLWTAEEDAKMLAHVAKHGTGNWTAVPKKAGLQRCGKSCRLRWTNY
                * ******: ***:**** *****:**:** **.***: :******:*************

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
pt023229_POPTR_ LRPDLKHDSFTPQEEEMIIRLHAAIGSRWSIIAQQLPGRTDNDVKNYWNARLRKKLSEMG
                **********:.****:**. * ******* **::***********:**::*:*** :**

AT3G28470.1     IDPVTHKPVSQLLAEFRNISG---HGNASFKTEPSNNSILTQSNSAW----EMMRNTTTN
pt023229_POPTR_ IDPVTHKPFSKILADYGNIGGLIKYGSRIGSLSRGLKNVFTLKPEQYPFTPEGMSNINS-
                ********.*::**:: **.*   :*.   . . . :.::* . . :    * * * .: 

AT3G28470.1     HESYYTNSPMMFTNSSEYQTTPFHFYSHPNHLLN---------GTTSSCSSSSSSTSITQ
pt023229_POPTR_ HLMTTTVPPKMESNQECFLNIMYNNDANSNHSLDLLDQLQAIKLVTEASSTCTAYQTIPA
                *    * .* * :*.. : .  ::  ::.** *:          .*.:.*:.::  :*. 

AT3G28470.1     PNQVPQTPVTNFYWSDFLLSD---PVPQVVGSSATS-DLTF-TQNEH-----HFNIEAEY
pt023229_POPTR_ PCILDESS-TSFSWCDFLLEDEYLPAEQENAAEFSSKDLTNQTQNPNVMIPQSFQSNTEV
                *  : ::. *.* *.****.*   *. *  .:. :* ***  *** :      *: ::* 

AT3G28470.1     ----------ISQNI--DSKASGTCHSASSFVDEILDKDQEMLSQFPQLLNDFDY-
pt023229_POPTR_ NAGVNGMDLALQSNTGSDDQVASSSSQHSSFVETIMDGESKIFLDFPNLLEEIFYY
                          :..*   *.:.:.:. . ****: *:* :.::: :**:**::: *
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
pt023229_POPTR_    M V R P P C C D R L N V K R G L W T A E E D A K M L A H V A K H G T G N W T A V P K K A G L Q R C G K S C R L R W T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
pt023229_POPTR_    L R P D L K H D S F T P Q E E E M I I R L H A A I G S R W S I I A Q Q L P G R T D N D V K N Y W N A R L R K K L S E M G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G - - - H G N A S F K T E P S N N S I L T Q S N S A W - - - - E M M R N T T T N
pt023229_POPTR_    I D P V T H K P F S K I L A D Y G N I G G L I K Y G S R I G S L S R G L K N V F T L K P E Q Y P F T P E G M S N I N S -
 
AT3G28470.1     H E S Y Y T N S P M M F T N S S E Y Q T T P F H F Y S H P N H L L N - - - - - - - - - G T T S S C S S S S S S T S I T Q
pt023229_POPTR_    H L M T T T V P P K M E S N Q E C F L N I M Y N N D A N S N H S L D L L D Q L Q A I K L V T E A S S T C T A Y Q T I P A
 
AT3G28470.1     P N Q V P Q T P V T N F Y W S D F L L S D - - - P V P Q V V G S S A T S - D L T F - T Q N E H - - - - - H F N I E A E Y
pt023229_POPTR_    P C I L D E S S - T S F S W C D F L L E D E Y L P A E Q E N A A E F S S K D L T N Q T Q N P N V M I P Q S F Q S N T E V
 
AT3G28470.1     - - - - - - - - - - I S Q N I - - D S K A S G T C H S A S S F V D E I L D K D Q E M L S Q F P Q L L N D F D Y -
pt023229_POPTR_    N A G V N G M D L A L Q S N T G S D D Q V A S S S S Q H S S F V E T I M D G E S K I F L D F P N L L E E I F Y Y
 
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