fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003280 not found in 380aa AT3G28470.1 1st_1st 0.444444444 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
pt003280_POPTR_ MGRPPCCDKSNVKRGLWTPEEDAKILAYVSNHGIGNWTSVPKKAGLNRCGKSCRLRWTNY
                *************:**** **********: **:***: :********************

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
pt003280_POPTR_ LRPDLKHERFAPEEEELIIKLHKAIGSRWSLIAKKLPGRTDNDVKNYWNTKLRKMLQKMG
                *******: *:.:******: *:******* **:************:*****:* * ***

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGHGNASFKTEPSNNSILTQSNSAWEMMRNTTTNHESYYTN
pt003280_POPTR_ IDPVTHKPFSQIFSDFGNISGISNTGNLNKSLNTSLMSEPDHQFSSAILTTPEHSCF---
                ********.**::::* **** .*:.  .:. *.*::::.:  :.    **.:*..:   

AT3G28470.1     SPMMFTNSSEYQTTPFHFYS------HPNH-------LLNGTTSSCSSSSSSTSIT----
pt003280_POPTR_ KKTMEQQVQEYNPTVTHPTSWDFLAQFPVHDTKQLPLFFNEVSSSCPSSTPSSSSTSTFT
                .  *  : .**:.*  *  *      .* *       ::* .:***.**:.*:* *    

AT3G28470.1     -----QPNQVPQ-TPVTNFYWSDFLLSDPVPQVVGSSATSDLTFTQNEHHFN--------
pt003280_POPTR_ QSYSCQKSQAPLITPTCTFTCTEFLLSDPV-------SSTEFQHQQEQYDFDEMFSPTNS
                     * .*.*  **. .*  ::*******       ::::: . *:::.*:        

AT3G28470.1     -----IEAEYISQNIDSKAS-----------------GTCH------------------S
pt003280_POPTR_ STMAMAQNDVSSCNITSTGSDDDWYLNRSVGRSTYDHGTVNNGLEENNNAADHAAYYSSS
                      : :  * ** *..*                 ** :                  *

AT3G28470.1     ASSFVDEILDKDQEMLSQFPQLLN-DFDY-
pt003280_POPTR_ ASSFVDGILDKDRELHSQFPPLLDPSFDCY
                ****** *****:*: **** **: .**
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
pt003280_POPTR_    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V S N H G I G N W T S V P K K A G L N R C G K S C R L R W T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
pt003280_POPTR_    L R P D L K H E R F A P E E E E L I I K L H K A I G S R W S L I A K K L P G R T D N D V K N Y W N T K L R K M L Q K M G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H G N A S F K T E P S N N S I L T Q S N S A W E M M R N T T T N H E S Y Y T N
pt003280_POPTR_    I D P V T H K P F S Q I F S D F G N I S G I S N T G N L N K S L N T S L M S E P D H Q F S S A I L T T P E H S C F - - -
 
AT3G28470.1     S P M M F T N S S E Y Q T T P F H F Y S - - - - - - H P N H - - - - - - - L L N G T T S S C S S S S S S T S I T - - - -
pt003280_POPTR_    K K T M E Q Q V Q E Y N P T V T H P T S W D F L A Q F P V H D T K Q L P L F F N E V S S S C P S S T P S S S S T S T F T
 
AT3G28470.1     - - - - - Q P N Q V P Q - T P V T N F Y W S D F L L S D P V P Q V V G S S A T S D L T F T Q N E H H F N - - - - - - - -
pt003280_POPTR_    Q S Y S C Q K S Q A P L I T P T C T F T C T E F L L S D P V - - - - - - - S S T E F Q H Q Q E Q Y D F D E M F S P T N S
 
AT3G28470.1     - - - - - I E A E Y I S Q N I D S K A S - - - - - - - - - - - - - - - - - G T C H - - - - - - - - - - - - - - - - - - S
pt003280_POPTR_    S T M A M A Q N D V S S C N I T S T G S D D D W Y L N R S V G R S T Y D H G T V N N G L E E N N N A A D H A A Y Y S S S
 
AT3G28470.1     A S S F V D E I L D K D Q E M L S Q F P Q L L N - D F D Y -
pt003280_POPTR_    A S S F V D G I L D K D R E L H S Q F P P L L D P S F D C Y
 
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