fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002167 not found in 328aa AT3G28470.1 1st_1st 0.338028169 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
Sb002167_Sorbi1 MGRPPCCDKANVKKGPWTPEEDAKLLAYTSTHGTGNWTNVPQRAGLKRCGKSCRLRYTNY
                *********:***** ** *****:***.: **.***: :*::***:*********:***

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
Sb002167_Sorbi1 LRPNLKHENFTQEEEDLIVTLHAMLGSRWSLIANQLPGRTDNDVKNYWNTKLSKKLRQRG
                ***:***:.*: :**:**:  *  :***** **.:***********:*****.*** : *

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGHGNASFKTEPSNNSILTQSNSAWEMMRNTTTNHESYYTN
Sb002167_Sorbi1 IDPITHRPIADLM--------HSIGALAIRPPQPAS-SSPNGGYLPAPALPLVHDVAYHA
                ***:**:*:::*:        *. .::  .*.: :  :..*..:      .  *:  *  

AT3G28470.1     SPMMFTNSSEYQTTPFHFYSHPNHLLNGTTSSCSSSSSSTSITQPNQVPQTPVTNFYWSD
Sb002167_Sorbi1 AGMLPPKTEQQQV-----------VIARVDADAPASPTTTEHGQGQQLK--------WSD
                : *: .::.: *.           ::  . :...:*.::*.  * :*:         ***

AT3G28470.1     FLLSDPVPQVVGSSATSDLTFTQNEHHFNIEAEYI--SQNIDSKASGTCHS---------
Sb002167_Sorbi1 FLADDAAAAAAAAEAQQQQVVLGQYHH---EASAVGAGSGVAVYGAGSSSSAAAAGGDVG
                ** .*... ...:.* .: ..  : **   **. :  ...:   .:*:. *         

AT3G28470.1     --------ASSFVDEILDKDQEM-LSQF-PQLLNDFDY---------------------
Sb002167_Sorbi1 GGGGGDDGAAAFIDAILDCDKETGVDQLIAELLADPAYYAGSSSSSSEMGWGMGLLNAD
                        *::*:* *** *:*  :.*: .:** *  *
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
Sb002167_Sorbi1    M G R P P C C D K A N V K K G P W T P E E D A K L L A Y T S T H G T G N W T N V P Q R A G L K R C G K S C R L R Y T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
Sb002167_Sorbi1    L R P N L K H E N F T Q E E E D L I V T L H A M L G S R W S L I A N Q L P G R T D N D V K N Y W N T K L S K K L R Q R G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H G N A S F K T E P S N N S I L T Q S N S A W E M M R N T T T N H E S Y Y T N
Sb002167_Sorbi1    I D P I T H R P I A D L M - - - - - - - - H S I G A L A I R P P Q P A S - S S P N G G Y L P A P A L P L V H D V A Y H A
 
AT3G28470.1     S P M M F T N S S E Y Q T T P F H F Y S H P N H L L N G T T S S C S S S S S S T S I T Q P N Q V P Q T P V T N F Y W S D
Sb002167_Sorbi1    A G M L P P K T E Q Q Q V - - - - - - - - - - - V I A R V D A D A P A S P T T T E H G Q G Q Q L K - - - - - - - - W S D
 
AT3G28470.1     F L L S D P V P Q V V G S S A T S D L T F T Q N E H H F N I E A E Y I - - S Q N I D S K A S G T C H S - - - - - - - - -
Sb002167_Sorbi1    F L A D D A A A A A A A A E A Q Q Q Q V V L G Q Y H H - - - E A S A V G A G S G V A V Y G A G S S S S A A A A G G D V G
 
AT3G28470.1     - - - - - - - - A S S F V D E I L D K D Q E M - L S Q F - P Q L L N D F D Y - - - - - - - - - - - - - - - - - - - - -
Sb002167_Sorbi1    G G G G G D D G A A A F I D A I L D C D K E T G V D Q L I A E L L A D P A Y Y A G S S S S S S E M G W G M G L L N A D
 
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