fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035012 not found in 314aa AT3G28470.1 not_1st 0.452269170 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
gm035012_Glyma1 MGRPPCCDKSNVKRGLWTPEEDAKILAYVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNY
                *************:**** *********** **.***:*:********************

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
gm035012_Glyma1 LRPDLKHDGFTPQEEDLIINLHGAIGSRWSLIAKRLPGRTDNDVKNYWNTKLRKKLMKMG
                ********.*:.***:***: * ******* **::***********:*****:*******

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGHGNAS-----------------FKTEPSNNSILTQSNSA
gm035012_Glyma1 IDPVTHKPVSQVLSDLGSISGLPNTTNQMAFINKDLMMSNMPPTKTEPSDSN--------
                ***********:*::: .***  *::                  *****:..        

AT3G28470.1     WEMMRNTTTNHESYYTNSPMMFTNSSEYQTTPFHFYSHPNHLLNGTTSSCSSSSSS--TS
gm035012_Glyma1 -----------KSMVEHTQEVIINSENVQP----------QVLSEAASSTSSSSSSNLTQ
                           :*   ::  :: **.: *.          ::*. ::** ******  *.

AT3G28470.1     ITQPN----QVPQT----PVTNFYWSDFLLSD-------PVPQVVGSSATSDLTFTQNEH
gm035012_Glyma1 LGSPQSYSCQTPQAQISPPCSSFDWSEFLHSDSFNWSLNPPSGLMQSEAELSDNTKSNGH
                : .*:    *.**:    * :.* **:** **       * . :: *.*  . . ..* *

AT3G28470.1     HFNIEAEYISQNIDSKASGTCHSASSFVDEILDKDQEMLSQFPQLLN-DFDY
gm035012_Glyma1 DM--------QGAASEGSGS-GSAHSFVDGILDRDSEIRAAFPQLLDASFDY
                .:        *.  *:.**:  ** **** ***:*.*: : *****: .***
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
gm035012_Glyma1    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V A N H G T G N W T L V P K K A G L N R C G K S C R L R W T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
gm035012_Glyma1    L R P D L K H D G F T P Q E E D L I I N L H G A I G S R W S L I A K R L P G R T D N D V K N Y W N T K L R K K L M K M G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H G N A S - - - - - - - - - - - - - - - - - F K T E P S N N S I L T Q S N S A
gm035012_Glyma1    I D P V T H K P V S Q V L S D L G S I S G L P N T T N Q M A F I N K D L M M S N M P P T K T E P S D S N - - - - - - - -
 
AT3G28470.1     W E M M R N T T T N H E S Y Y T N S P M M F T N S S E Y Q T T P F H F Y S H P N H L L N G T T S S C S S S S S S - - T S
gm035012_Glyma1    - - - - - - - - - - - K S M V E H T Q E V I I N S E N V Q P - - - - - - - - - - Q V L S E A A S S T S S S S S S N L T Q
 
AT3G28470.1     I T Q P N - - - - Q V P Q T - - - - P V T N F Y W S D F L L S D - - - - - - - P V P Q V V G S S A T S D L T F T Q N E H
gm035012_Glyma1    L G S P Q S Y S C Q T P Q A Q I S P P C S S F D W S E F L H S D S F N W S L N P P S G L M Q S E A E L S D N T K S N G H
 
AT3G28470.1     H F N I E A E Y I S Q N I D S K A S G T C H S A S S F V D E I L D K D Q E M L S Q F P Q L L N - D F D Y
gm035012_Glyma1    D M - - - - - - - - Q G A A S E G S G S - G S A H S F V D G I L D R D S E I R A A F P Q L L D A S F D Y
 
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